FFCP PHASE1:Hg19::chr19:51452278..51452302,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:51452278..51452302,- | |||
|coexpression_cluster_id=C2500 | |coexpression_cluster_id=C2500 | ||
|description=CAGE_peak_at_chr19:51452278..51452302,- | |description=CAGE_peak_at_chr19:51452278..51452302,- | ||
Latest revision as of 16:34, 27 July 2015
| Short description: | p@chr19:51452278..51452302, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr19:51452278..51452302, - |
| Coexpression cluster: | C2500_Mammary_Prostate_oral_serous_Corneal_Keratinocyte_lung |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p@chr19:51452278..51452302- |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| general ecto-epithelial cell | 1.36e-27 | 14 |
| corneal epithelial cell | 3.67e-17 | 2 |
| keratinocyte | 3.16e-15 | 5 |
| epidermal cell | 9.39e-15 | 9 |
| endo-epithelial cell | 3.51e-14 | 42 |
| ecto-epithelial cell | 3.84e-14 | 34 |
| epithelial cell of alimentary canal | 8.11e-14 | 20 |
| stratified squamous epithelial cell | 8.80e-13 | 6 |
| keratin accumulating cell | 8.80e-13 | 6 |
| stratified epithelial cell | 8.80e-13 | 6 |
Showing 1 to 10 of 22 entries
| Ontology term | p-value | n |
|---|---|---|
| surface structure | 2.13e-20 | 99 |
| mucosa of oral region | 1.94e-18 | 4 |
| respiratory system mucosa | 1.94e-18 | 4 |
| oral opening | 5.91e-17 | 22 |
| orifice | 1.03e-16 | 36 |
| mouth mucosa | 3.53e-15 | 13 |
| skin epidermis | 2.24e-13 | 15 |
| outer epithelium | 2.24e-13 | 15 |
| enveloping layer of ectoderm | 2.24e-13 | 15 |
| mouth | 1.10e-12 | 29 |
Showing 1 to 10 of 33 entries
| Ontology term | p-value | n |
|---|---|---|
| squamous cell carcinoma | 2.59e-09 | 14 |
Showing 1 to 1 of 1 entries
