FFCP PHASE1:Hg19::chr1:115782401..115782425,+: Difference between revisions
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|id=chr1:115782401..115782425,+
|short_description=p@chr1:115782401..115782425,+
|description=CAGE_peak_at_chr1:115782401..115782425,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:115782401..115782425,+ | |||
|coexpression_cluster_id=C3851 | |||
|description=CAGE_peak_at_chr1:115782401..115782425,+ | |||
|id=chr1:115782401..115782425,+ | |||
|ontology_enrichment_celltype=CL:0000057!9.15e-44!75;CL:0002620!7.86e-38!23;CL:0000055!7.35e-21!180;CL:0002334!3.47e-17!12;CL:0000048!8.61e-10!430;CL:0000723!1.80e-09!436;CL:0000134!2.11e-09!358;CL:0000034!4.65e-09!444;CL:0002320!5.41e-09!365;CL:0000197!1.57e-08!6;CL:0000098!1.57e-08!6;CL:0002167!1.57e-08!6;CL:0000219!3.63e-08!390;CL:1000306!1.41e-07!4;CL:0002547!1.41e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.59e-28;23!CL:0000197;3.10e-18;6!CL:0000098;3.10e-18;6!CL:0002167;3.10e-18;6!CL:0000222;1.13e-08;1!CL:0002581;4.25e-08;1!CL:1000306;5.93e-08;4!CL:0002547;5.93e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.35e-28,23;CL:0000057,3.63e-20,76;CL:0000197,2.16e-18,6;CL:0000098,2.16e-18,6;CL:0002167,2.16e-18,6;CL:0002581,4.11e-08,1;CL:1000306,5.45e-08,4;CL:0002547,5.45e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!2.90e-15!5;DOID:450!2.90e-15!5;DOID:66!2.90e-15!5;DOID:423!2.90e-15!5;DOID:0080000!2.90e-15!5;DOID:11722!2.90e-15!5 | |||
|ontology_enrichment_disease_v019=DOID:2513;9.78e-09;1!DOID:6193;4.25e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,9.79e-09,1;DOID:6193,2.69e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002199!7.14e-24!45;UBERON:0002416!7.14e-24!45;UBERON:0002097!2.73e-22!40;UBERON:0003102!6.35e-14!95;UBERON:0002384!4.66e-09!375;UBERON:0000415!1.41e-07!4;UBERON:0007240!1.41e-07!4;UBERON:0005742!1.41e-07!4;UBERON:0005734!1.41e-07!4;UBERON:0004664!1.41e-07!4;UBERON:0004663!1.41e-07!4;UBERON:0003688!1.83e-07!6;UBERON:0002358!1.83e-07!6;UBERON:0003684!1.83e-07!6;UBERON:0001178!1.83e-07!6;UBERON:0001013!3.60e-07!14;UBERON:0005406!4.51e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;3.42e-12;41!UBERON:0002199;7.63e-12;46!UBERON:0002416;7.63e-12;46!UBERON:0003102;2.21e-08;50!UBERON:0004797;5.93e-08;4!UBERON:0000415;5.93e-08;4!UBERON:0007240;5.93e-08;4!UBERON:0005742;5.93e-08;4!UBERON:0005734;5.93e-08;4!UBERON:0004664;5.93e-08;4!UBERON:0004663;5.93e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.08e-18,41;UBERON:0002199,1.89e-16,46;UBERON:0002416,1.89e-16,46;UBERON:0000415,5.45e-08,4;UBERON:0007240,5.45e-08,4;UBERON:0005742,5.45e-08,4;UBERON:0005734,5.45e-08,4;UBERON:0004664,5.45e-08,4;UBERON:0004663,5.45e-08,4;UBERON:0003102,6.29e-08,99 | |||
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|phase1_expression=0.181678379270557,0,0.281908808191942,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.633152558322899,4.36950296683622,1.72101972449288,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0.140450806702248,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,1.22595118319608,0,0,3.7671823494661,0.85422955527427,0.635795703478686,2.70081986475962,0.515262646192195,2.31876486041066,0.37223371266318,9.28269827326964,0.779496041289589,3.5340728394176,1.01254888506529,1.77810662500693,1.77504796258307,1.30977727695932,1.52604533079439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,2.02693829334611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45579603071565,1.78428988797162,1.10391690523754,1.99140405487612,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0.160853921143607,1.48418066444991,0.771048469013278,0.355123450626254,1.06765302817952,0,0.232420756919918,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2643063928396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89184635718778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23882204330311,0.233713309847224,2.21922344601045,0,0,0.889811221596536,0.686520205190771,2.11723293268535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.57109389371906,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0,0,0,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27201740261367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0,2.59575937274273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:115782401..115782425,+ | |||
}} | }} |
Latest revision as of 20:01, 27 July 2015
Short description: | p@chr1:115782401..115782425, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:115782401..115782425, + |
Coexpression cluster: | C3851_basal_Fibroblast_mesodermal_Olfactory_mesenchymal_Myoblast_neurofibroma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.35e-28 | 23 |
fibroblast | 3.63e-20 | 76 |
receptor cell | 2.16e-18 | 6 |
sensory epithelial cell | 2.16e-18 | 6 |
olfactory epithelial cell | 2.16e-18 | 6 |
perirenal preadipocyte | 4.11e-08 | 1 |
fibroblast of tunica adventitia of artery | 5.45e-08 | 4 |
fibroblast of the aortic adventitia | 5.45e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.08e-18 | 41 |
integument | 1.89e-16 | 46 |
integumental system | 1.89e-16 | 46 |
artery wall | 5.45e-08 | 4 |
tunica adventitia of artery | 5.45e-08 | 4 |
adventitia | 5.45e-08 | 4 |
tunica adventitia of blood vessel | 5.45e-08 | 4 |
aorta tunica adventitia | 5.45e-08 | 4 |
aorta wall | 5.45e-08 | 4 |
surface structure | 6.29e-08 | 99 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 9.79e-09 | 1 |
epithelioid sarcoma | 2.69e-08 | 1 |