FFCP PHASE1:Hg19::chr1:116908533..116908577,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:116908533..116908577,+ | |||
|coexpression_cluster_id=C85 | |coexpression_cluster_id=C85 | ||
|description=CAGE_peak_at_chr1:116908533..116908577,+ | |description=CAGE_peak_at_chr1:116908533..116908577,+ | ||
|id=chr1:116908533..116908577,+ | |id=chr1:116908533..116908577,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.48e-40;5!CL:0002321;1.22e-14;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!1.62e-20!10;DOID:169!1.10e-19!6;DOID:3095!1.80e-09!22;DOID:2994!1.80e-09!22 | |ontology_enrichment_disease=DOID:171!1.62e-20!10;DOID:169!1.10e-19!6;DOID:3095!1.80e-09!22;DOID:2994!1.80e-09!22 | ||
|ontology_enrichment_disease_v019=DOID:169;4.27e-34;6!DOID:171;3.81e-21;10!DOID:3095;1.80e-10;22!DOID:2994;1.80e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,4.27e-34,6;DOID:171,3.81e-21,10;DOID:3095,1.80e-10,22;DOID:2994,1.80e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0000013!1.76e-23!5;UBERON:0002410!1.76e-23!5;UBERON:0000073!4.71e-20!94;UBERON:0001016!4.71e-20!94;UBERON:0007190!1.61e-13!1;UBERON:0001017!1.64e-13!82;UBERON:0000010!2.47e-13!8;UBERON:0000955!4.80e-13!69;UBERON:0006238!4.80e-13!69;UBERON:0005743!7.64e-13!86;UBERON:0000924!3.68e-12!173;UBERON:0006601!3.68e-12!173;UBERON:0004121!1.33e-10!169;UBERON:0001049!8.42e-10!57;UBERON:0005068!8.42e-10!57;UBERON:0006241!8.42e-10!57;UBERON:0007135!8.42e-10!57;UBERON:0001950!1.21e-09!20;UBERON:0002616!1.87e-09!59;UBERON:0001869!2.91e-09!32;UBERON:0000200!3.28e-09!6;UBERON:0002619!8.00e-09!22;UBERON:0002020!9.45e-09!34;UBERON:0003528!9.45e-09!34;UBERON:0001893!9.94e-09!34;UBERON:0002346!7.70e-08!90;UBERON:0000956!7.90e-08!25;UBERON:0000203!7.90e-08!25;UBERON:0007023!1.17e-07!115;UBERON:0002148!1.75e-07!2;UBERON:0009662!1.75e-07!2;UBERON:0001870!2.40e-07!2;UBERON:0002780!2.94e-07!41;UBERON:0001890!2.94e-07!41;UBERON:0006240!2.94e-07!41;UBERON:0003080!4.35e-07!42;UBERON:0000033!5.87e-07!123 | |ontology_enrichment_uberon=UBERON:0000013!1.76e-23!5;UBERON:0002410!1.76e-23!5;UBERON:0000073!4.71e-20!94;UBERON:0001016!4.71e-20!94;UBERON:0007190!1.61e-13!1;UBERON:0001017!1.64e-13!82;UBERON:0000010!2.47e-13!8;UBERON:0000955!4.80e-13!69;UBERON:0006238!4.80e-13!69;UBERON:0005743!7.64e-13!86;UBERON:0000924!3.68e-12!173;UBERON:0006601!3.68e-12!173;UBERON:0004121!1.33e-10!169;UBERON:0001049!8.42e-10!57;UBERON:0005068!8.42e-10!57;UBERON:0006241!8.42e-10!57;UBERON:0007135!8.42e-10!57;UBERON:0001950!1.21e-09!20;UBERON:0002616!1.87e-09!59;UBERON:0001869!2.91e-09!32;UBERON:0000200!3.28e-09!6;UBERON:0002619!8.00e-09!22;UBERON:0002020!9.45e-09!34;UBERON:0003528!9.45e-09!34;UBERON:0001893!9.94e-09!34;UBERON:0002346!7.70e-08!90;UBERON:0000956!7.90e-08!25;UBERON:0000203!7.90e-08!25;UBERON:0007023!1.17e-07!115;UBERON:0002148!1.75e-07!2;UBERON:0009662!1.75e-07!2;UBERON:0001870!2.40e-07!2;UBERON:0002780!2.94e-07!41;UBERON:0001890!2.94e-07!41;UBERON:0006240!2.94e-07!41;UBERON:0003080!4.35e-07!42;UBERON:0000033!5.87e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.48e-40;5!UBERON:0002410;1.48e-40;5!UBERON:0000010;2.62e-23;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.48e-40,5;UBERON:0002410,1.48e-40,5;UBERON:0000010,2.62e-23,8 | |||
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|short_description=p@chr1:116908533..116908577,+ | |short_description=p@chr1:116908533..116908577,+ | ||
}} | }} |
Latest revision as of 20:04, 27 July 2015
Short description: | p@chr1:116908533..116908577, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:116908533..116908577, + |
Coexpression cluster: | C85_neuroblastoma_carcinoid_retinoblastoma_small_pineal_rhabdomyosarcoma_medulloblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.48e-40 | 5 |
autonomic nervous system | 1.48e-40 | 5 |
peripheral nervous system | 2.62e-23 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 4.27e-34 | 6 |
neuroectodermal tumor | 3.81e-21 | 10 |
germ cell and embryonal cancer | 1.80e-10 | 22 |
germ cell cancer | 1.80e-10 | 22 |