FFCP PHASE1:Hg19::chr1:118570948..118570964,-: Difference between revisions
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|id=chr1:118570948..118570964,-
|short_description=p@chr1:118570948..118570964,-
|description=CAGE_peak_at_chr1:118570948..118570964,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:118570948..118570964,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_at_chr1:118570948..118570964,- | |||
|id=chr1:118570948..118570964,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.46e-50;1 | |||
|ontology_enrichment_disease=DOID:3151!9.92e-13!1;DOID:3149!9.92e-13!1;DOID:3451!5.41e-07!2;DOID:4159!5.41e-07!2;DOID:0060122!5.41e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3151;3.99e-50;1!DOID:3149;3.99e-50;1!DOID:3451;7.14e-26;2!DOID:4159;7.14e-26;2!DOID:0060122;7.14e-26;2!DOID:4362;3.26e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,6.58e-50,1;DOID:3149,6.58e-50,1;DOID:3451,9.18e-26,2;DOID:4159,9.18e-26,2;DOID:0060122,9.18e-26,2;DOID:4362,2.94e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0000996!1.11e-12!1;UBERON:0002372!1.40e-12!1;UBERON:0001961!1.40e-12!1;UBERON:0001744!1.40e-12!1;UBERON:0001735!1.40e-12!1;UBERON:0007029!1.57e-12!1;UBERON:0006834!2.75e-12!1;UBERON:0000014!3.09e-12!4;UBERON:0000002!1.44e-08!6;UBERON:0001560!1.44e-08!6;UBERON:0003975!1.95e-08!22;UBERON:0000161!8.26e-08!35;UBERON:0004175!1.92e-07!25;UBERON:0003127!7.20e-07!2;UBERON:0000341!7.61e-07!2;UBERON:0001255!9.54e-07!2;UBERON:0001556!9.54e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000002;9.87e-34;6!UBERON:0001560;9.87e-34;6!UBERON:0001043;6.76e-18;3!UBERON:0000014;1.13e-13;4!UBERON:0000995;1.09e-12;17!UBERON:0003975;4.81e-12;18!UBERON:0004175;1.77e-10;21!UBERON:0003134;3.69e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000002,8.35e-34,6;UBERON:0001560,8.35e-34,6;UBERON:0001043,6.76e-18,3;UBERON:0009143,6.76e-18,3;UBERON:0000014,1.29e-13,4;UBERON:0000995,1.69e-10,21;UBERON:0005795,4.53e-10,22;UBERON:0003975,4.53e-10,22;UBERON:0004175,5.49e-09,25 | |||
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|short_description=p@chr1:118570948..118570964,- | |||
}} | }} |
Latest revision as of 20:14, 27 July 2015
Short description: | p@chr1:118570948..118570964, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:118570948..118570964, - |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterine cervix | 8.35e-34 | 6 |
neck of organ | 8.35e-34 | 6 |
esophagus | 6.76e-18 | 3 |
esophageal region | 6.76e-18 | 3 |
zone of skin | 1.29e-13 | 4 |
uterus | 1.69e-10 | 21 |
embryonic uterus | 4.53e-10 | 22 |
internal female genitalia | 4.53e-10 | 22 |
internal genitalia | 5.49e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 6.58e-50 | 1 |
keratoacanthoma | 6.58e-50 | 1 |
skin carcinoma | 9.18e-26 | 2 |
skin cancer | 9.18e-26 | 2 |
integumentary system cancer | 9.18e-26 | 2 |
cervical cancer | 2.94e-11 | 5 |