FFCP PHASE1:Hg19::chr1:160966609..160966644,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:160966609..160966644,- | |||
|description=CAGE_peak_at_chr1:160966609..160966644,- | |description=CAGE_peak_at_chr1:160966609..160966644,- | ||
|id=chr1:160966609..160966644,- | |id=chr1:160966609..160966644,- | ||
|ontology_enrichment_celltype=CL:0000066!4.36e-15!254;CL:0000039!1.17e-10!7;CL:0000586!1.17e-10!7;CL:0000223!4.40e-08!59;CL:0000076!6.96e-08!62;CL:0002076!8.31e-07!43 | |ontology_enrichment_celltype=CL:0000066!4.36e-15!254;CL:0000039!1.17e-10!7;CL:0000586!1.17e-10!7;CL:0000223!4.40e-08!59;CL:0000076!6.96e-08!62;CL:0002076!8.31e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0000039;6.90e-25;7!CL:0000586;6.90e-25;7!CL:0002097;1.25e-15;2!CL:0000174;1.00e-10;3!CL:0000083;4.08e-08;4!CL:0000150;9.58e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,8.04e-25,7;CL:0000586,8.04e-25,7;CL:0002097,1.35e-15,2;CL:0000066,7.52e-11,253;CL:0000174,1.05e-10,3;CL:0000083,4.38e-08,4;CL:0000150,9.81e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.43e-11;10!UBERON:0005564;1.43e-11;10 | |||
|ontology_enrichment_disease=DOID:305!8.06e-26!106;DOID:0050687!4.50e-22!143;DOID:162!3.44e-15!235;DOID:14566!1.94e-14!239;DOID:1749!1.19e-11!14;DOID:0050615!5.41e-08!16;DOID:299!8.45e-08!25;DOID:1324!5.21e-07!15 | |ontology_enrichment_disease=DOID:305!8.06e-26!106;DOID:0050687!4.50e-22!143;DOID:162!3.44e-15!235;DOID:14566!1.94e-14!239;DOID:1749!1.19e-11!14;DOID:0050615!5.41e-08!16;DOID:299!8.45e-08!25;DOID:1324!5.21e-07!15 | ||
|ontology_enrichment_disease_v019=DOID:170;1.53e-19;6!DOID:1749;6.25e-13;14!DOID:305;2.27e-09;106!DOID:1799;9.45e-09;1!DOID:10165;9.45e-09;1!DOID:1798;9.45e-09;1!DOID:3111;1.37e-08;1!DOID:3603;1.37e-08;1!DOID:1793;4.08e-08;4!DOID:3095;8.05e-08;22!DOID:2994;8.05e-08;22!DOID:3908;8.40e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.94e-26,106;DOID:0050687,1.85e-22,143;DOID:170,1.77e-19,6;DOID:162,2.50e-13,235;DOID:1749,5.38e-13,14;DOID:14566,5.83e-13,239;DOID:1799,8.78e-09,1;DOID:10165,8.78e-09,1;DOID:1798,8.78e-09,1;DOID:3111,1.59e-08,1;DOID:3603,1.59e-08,1;DOID:1793,4.38e-08,4;DOID:3095,8.42e-08,22;DOID:2994,8.42e-08,22;DOID:3908,8.17e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.98e-12!169;UBERON:0000925!5.98e-12!169;UBERON:0006595!5.98e-12!169;UBERON:0004921!1.52e-10!129;UBERON:0004185!1.52e-10!129;UBERON:0000077!1.78e-10!130;UBERON:0001007!2.33e-10!155;UBERON:0001555!2.33e-10!155;UBERON:0007026!2.33e-10!155;UBERON:0000464!7.80e-10!104;UBERON:0000466!1.46e-09!126;UBERON:0002553!2.67e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0002369;1.00e-10;3!UBERON:0001235;1.00e-10;3!UBERON:0006858;1.00e-10;3!UBERON:0000997;1.37e-08;1!UBERON:0005056;1.37e-08;1!UBERON:0004176;1.37e-08;1!UBERON:0000473;1.69e-08;8!UBERON:0002171;2.64e-08;1!UBERON:0006518;2.64e-08;1!UBERON:0008949;2.64e-08;1!UBERON:0000101;2.64e-08;1!UBERON:0002167;2.64e-08;1!UBERON:0002323;3.19e-07;45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,1.05e-10,3;UBERON:0001235,1.05e-10,3;UBERON:0006858,1.05e-10,3;UBERON:0000997,1.18e-08,1;UBERON:0005056,1.18e-08,1;UBERON:0000473,2.31e-08,8;UBERON:0002171,2.84e-08,1;UBERON:0006518,2.84e-08,1;UBERON:0008949,2.84e-08,1;UBERON:0000101,2.84e-08,1;UBERON:0002167,2.84e-08,1;UBERON:0004176,7.36e-08,22;UBERON:0002323,9.30e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0.697287110717054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0,0.402829317109147,0,0,0.367663080345869,0,0.0892997282840798,0.44905874525234,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.768760269460425,0,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0.18714054040822,0,0.121360521749513,0,0.284136146806413,0.47748896947538,0,0,0,0,0,0,0,0,0.276283915531148,0.503865495708552,0,0,0,0,1.07412704805365,0,0.0986434056369336,0,0,0,0,0,3.1251331330228,0.787139999965761,0,0.455173793141999,4.57656570526979,0.945550727071745,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,1.84451123510448,0.0897576444097721,1.84700532267414,0.31900115973192,0,0.533034776018635,0,0,0.166211681900156,0,0,0,0.37950746544837,0,0.632994193584081,0,0.141353071433941,0,0,0.176915129006678,0,0.296521128680622,0,0,0,0,0,0,1.17398771359254,0,0,1.20990716048664,0,0,0,0,0.664653872707185,0,0,0,1.70765727617876,0,0.347119476670262,2.84177952501695,0,0,0,0,0,0,0.0969890164884194,0,0,0,0.397429223405979,0,3.32437350649165,0.240476460754601,0,0,0.144090417154106,0,0,0,0,5.42096279618629,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0.412618309791701,0.415440338029185,0,0,0,0,0.236417121897595,0,0.422401346077626,0,2.49489756515279,0,0,0.5085370753095,0,0,0,0,0.410462603746695,0,0.113312091520126,0,0,0,0,0.855434189421647,1.40963004463334,0,0,1.24271716604159,0,0,0,7.66009509324218,0.544017803369474,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0.874862855734746,0.151649117541648,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,3.08191728651685,2.35885750512418,0,0,0.231522474323834,0,0,0.617602894321944,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,2.11312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0.235939446695481,0.183428598521679,0.231051332300676,0,0,0.198916222116275,0,0,0,3.14288033377707,0,0.591424344868181,0,0,0,0,0,0.548257766857182,0,0,3.06629826335029,0,0,0,0,0.0887023701626388,0,0,0,0,0.354581522651905,0.667388411352415,0.078493092850514,0,5.0448989396482,0.913158720509496,0,0,0,0,0.348724276104376,0,0,0.207216164163037,0.17071847709395,1.38251932362818,0.430227358820278,0,0,0.423387050190929,0,0,0,0.335566295393377,0.196300467230486,0,0,0,0,0,0.467878926924211,0,0,0.22589216407792,0,0,0.231522474323834,0.437119121007915,0,0,0.942706188406504,0,0,0,0,0.0939839179798536,0,0,13.2129914568187,1.76447435857846,0.641930933513346,0,0,0,0.157771562193185,0,0,0,0,0,0,0.126166424835079,0.109265571963696,0,2.2437542543236,1.06886962106224,1.01084389488329,0.50141507858475,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0,0,0.606351566874658,0,0,0,0.0717222053926763,0,0.162806537221949,0.106727345877715,0,0.0898252021065869,0,0,0,0.665756774185513,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0.697287110717054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0,0.402829317109147,0,0,0.367663080345869,0,0.0892997282840798,0.44905874525234,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.768760269460425,0,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0.18714054040822,0,0.121360521749513,0,0.284136146806413,0.47748896947538,0,0,0,0,0,0,0,0,0.276283915531148,0.503865495708552,0,0,0,0,1.07412704805365,0,0.0986434056369336,0,0,0,0,0,3.1251331330228,0.787139999965761,0,0.455173793141999,4.57656570526979,0.945550727071745,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,1.84451123510448,0.0897576444097721,1.84700532267414,0.31900115973192,0,0.533034776018635,0,0,0.166211681900156,0,0,0,0.37950746544837,0,0.632994193584081,0,0.141353071433941,0,0,0.176915129006678,0,0.296521128680622,0,0,0,0,0,0,1.17398771359254,0,0,1.20990716048664,0,0,0,0,0.664653872707185,0,0,0,1.70765727617876,0,0.347119476670262,2.84177952501695,0,0,0,0,0,0,0.0969890164884194,0,0,0,0.397429223405979,0,3.32437350649165,0.240476460754601,0,0,0.144090417154106,0,0,0,0,5.42096279618629,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0.412618309791701,0.415440338029185,0,0,0,0,0.236417121897595,0,0.422401346077626,0,2.49489756515279,0,0,0.5085370753095,0,0,0,0,0.410462603746695,0,0.113312091520126,0,0,0,0,0.855434189421647,1.40963004463334,0,0,1.24271716604159,0,0,0,7.66009509324218,0.544017803369474,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0.874862855734746,0.151649117541648,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,3.08191728651685,2.35885750512418,0,0,0.231522474323834,0,0,0.617602894321944,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,2.11312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0.235939446695481,0.183428598521679,0.231051332300676,0,0,0.198916222116275,0,0,0,3.14288033377707,0,0.591424344868181,0,0,0,0,0,0.548257766857182,0,0,3.06629826335029,0,0,0,0,0.0887023701626388,0,0,0,0,0.354581522651905,0.667388411352415,0.078493092850514,0,5.0448989396482,0.913158720509496,0,0,0,0,0.348724276104376,0,0,0.207216164163037,0.17071847709395,1.38251932362818,0.430227358820278,0,0,0.423387050190929,0,0,0,0.335566295393377,0.196300467230486,0,0,0,0,0,0.467878926924211,0,0,0.22589216407792,0,0,0.231522474323834,0.437119121007915,0,0,0.942706188406504,0,0,0,0,0.0939839179798536,0,0,13.2129914568187,1.76447435857846,0.641930933513346,0,0,0,0.157771562193185,0,0,0,0,0,0,0.126166424835079,0.109265571963696,0,2.2437542543236,1.06886962106224,1.01084389488329,0.50141507858475,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0,0,0.606351566874658,0,0,0,0.0717222053926763,0,0.162806537221949,0.106727345877715,0,0.0898252021065869,0,0,0,0.665756774185513,0,0 | ||
|short_description=p@chr1:160966609..160966644,- | |short_description=p@chr1:160966609..160966644,- | ||
}} | }} |
Latest revision as of 23:28, 27 July 2015
Short description: | p@chr1:160966609..160966644, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:160966609..160966644, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 8.04e-25 | 7 |
germ cell | 8.04e-25 | 7 |
cortical cell of adrenal gland | 1.35e-15 | 2 |
epithelial cell | 7.52e-11 | 253 |
steroid hormone secreting cell | 1.05e-10 | 3 |
epithelial cell of pancreas | 4.38e-08 | 4 |
glandular epithelial cell | 9.81e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 1.05e-10 | 3 |
adrenal cortex | 1.05e-10 | 3 |
adrenal/interrenal gland | 1.05e-10 | 3 |
mammalian vulva | 1.18e-08 | 1 |
external female genitalia | 1.18e-08 | 1 |
testis | 2.31e-08 | 8 |
lower lobe of right lung | 2.84e-08 | 1 |
right lung lobe | 2.84e-08 | 1 |
lower lobe of lung | 2.84e-08 | 1 |
lobe of lung | 2.84e-08 | 1 |
right lung | 2.84e-08 | 1 |
external genitalia | 7.36e-08 | 22 |
body cavity | 9.30e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.94e-26 | 106 |
cell type cancer | 1.85e-22 | 143 |
endocrine gland cancer | 1.77e-19 | 6 |
cancer | 2.50e-13 | 235 |
squamous cell carcinoma | 5.38e-13 | 14 |
disease of cellular proliferation | 5.83e-13 | 239 |
islet cell tumor | 8.78e-09 | 1 |
endocrine pancreas cancer | 8.78e-09 | 1 |
pancreatic endocrine carcinoma | 8.78e-09 | 1 |
cystadenocarcinoma | 1.59e-08 | 1 |
mucinous cystadenocarcinoma | 1.59e-08 | 1 |
pancreatic cancer | 4.38e-08 | 4 |
germ cell and embryonal cancer | 8.42e-08 | 22 |
germ cell cancer | 8.42e-08 | 22 |
non-small cell lung carcinoma | 8.17e-07 | 5 |