FFCP PHASE1:Hg19::chr1:167603627..167603630,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:167603627..167603630,+ | |||
|description=CAGE_peak_at_chr1:167603627..167603630,+ | |description=CAGE_peak_at_chr1:167603627..167603630,+ | ||
|id=chr1:167603627..167603630,+ | |id=chr1:167603627..167603630,+ | ||
|ontology_enrichment_celltype=CL:0000037!7.37e-35!172;CL:0000566!7.37e-35!172;CL:0000988!7.39e-35!182;CL:0002032!2.28e-32!165;CL:0000837!2.28e-32!165;CL:0000542!2.59e-30!53;CL:0000051!2.59e-30!53;CL:0000838!5.45e-29!52;CL:0002087!4.57e-26!119;CL:0000738!4.24e-25!140;CL:0002031!7.40e-22!124;CL:0000945!6.10e-20!24;CL:0000826!6.10e-20!24;CL:0000236!1.79e-12!14;CL:0000084!4.85e-10!25;CL:0000827!4.85e-10!25;CL:0000763!6.02e-09!112;CL:0000049!6.02e-09!112;CL:0000625!5.26e-08!11 | |ontology_enrichment_celltype=CL:0000037!7.37e-35!172;CL:0000566!7.37e-35!172;CL:0000988!7.39e-35!182;CL:0002032!2.28e-32!165;CL:0000837!2.28e-32!165;CL:0000542!2.59e-30!53;CL:0000051!2.59e-30!53;CL:0000838!5.45e-29!52;CL:0002087!4.57e-26!119;CL:0000738!4.24e-25!140;CL:0002031!7.40e-22!124;CL:0000945!6.10e-20!24;CL:0000826!6.10e-20!24;CL:0000236!1.79e-12!14;CL:0000084!4.85e-10!25;CL:0000827!4.85e-10!25;CL:0000763!6.02e-09!112;CL:0000049!6.02e-09!112;CL:0000625!5.26e-08!11 | ||
|ontology_enrichment_celltype_v019=CL:0000236;7.79e-30;13!CL:0000945;7.86e-16;24!CL:0000542;4.40e-10;53!CL:0000785;1.26e-09;1!CL:0000819;1.26e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.66e-27,14;CL:0000945,9.56e-16,24;CL:0000826,9.56e-16,24;CL:0000542,5.96e-11,53;CL:0000051,5.96e-11,53;CL:0000819,1.56e-09,1;CL:0000838,7.46e-09,52;CL:0002032,1.86e-08,161;CL:0000837,1.86e-08,161;CL:0000037,5.40e-08,168;CL:0000988,1.88e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;4.40e-10;53!UBERON:0001045;3.12e-09;1 | |||
|ontology_enrichment_disease=DOID:2531!3.04e-19!51;DOID:0060083!3.04e-19!51;DOID:1240!1.80e-14!39;DOID:8692!1.18e-08!31;DOID:0060058!4.80e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:0060073;1.26e-09;1!DOID:8675;1.26e-09;1!DOID:12603;3.12e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,1.56e-09,1;DOID:8675,1.56e-09,1;DOID:12603,2.55e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.27e-08!102;UBERON:0003061!5.27e-08!102;UBERON:0002193!8.65e-08!112;UBERON:0000178!7.81e-07!15;UBERON:0000179!7.81e-07!15;UBERON:0000463!7.81e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;3.12e-09;1!UBERON:0001153;3.12e-09;1!UBERON:0009854;3.12e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,2.77e-09,1;UBERON:0001153,2.77e-09,1;UBERON:0001045,2.77e-09,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.246301768349837,0.314843125254717,0,0,0,0,0,0,0.309868802321207,0.284338464974843,0.293600439334847,0,0.200544447470142,0.217010870715852,0.671746422719773,0.32389366601898,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0.612167784741805,0,1.27867425159808,0,0,0,0,0,0.622822248995575,0,0,0,0.605399502633369,0,0.316462387440884,0,0,0,0,0.300353785683013,0,0,0,0.182664153764634,3.51992488922645,3.27683166757279,0,2.56038133539904,1.20118796110804,1.14950487990897,0,0,1.1384259382189,0.587237189370939,0.382273228125229,0,0,0.263384084775077,0,0,0.205601498999509,0.167186495390678,0,0,0,0.334231370655521,0,0.664601683750863,0.270803863765016,1.5370958367081,1.56071217071854,2.13769275984779,1.10540007114339,0.289803085735052,0,0,1.04535523804977,0.453237370790265,0,0,0.506039384039006,0.318565414324097,0.651083453856419,0,0,0.383959833463255,1.24930726552346,0.473554504088034,0.821127996921047,0,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0.148631162288728,0,0,0,0,0,0,0,0.264145302039678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,0.394061520403854,0,0.128343036279748,0,0,0,0,0,1.49801404789436,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70894156152249,0.714695326373367,2.05681136543097,0,0,1.58625035258854,0,0,0,1.48642540100575,0.144269212976445,0.355709216742071,0.318852545457645,0.59873811429845,0,1.05836791361941,0.649243880549111,0,0.228234679033192,0.156679895773023,2.50634477090067,0,0.802940375518498,2.01799707191048,0,0.343505344755765,0,0,0,0.390776190804081,0,0,0,0,0,0,0,0,0.780103689942349,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,1.38141957765574,0,0,0.123084805461069,0,0,0,0.511572370226872,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0.217294743844016,0,0,0,0,0.31396051279005,0.166211681900156,0,0,0.335643173951685,0.569261198172555,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0.208843899010911,0.067401132980677,0,0,2.00700268137233,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0,0.429226048136571,0,0.134366944973453,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0,0.496166021811951,0.395223263795889,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0.426766918776564,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02520268501629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.281951753939561,0.128915775947154,0,0,0,0,0,0.458729283404541,0.286679166302903,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0.103432995861895,0,0,0.0645889098360061,0.31037357147929,0,0,0.202117188958219,0,0,0.336760265072938,0,0,0,0,0,0,0,0.122241444182866,0,0,0.603821380773079,0 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| ||
|short_description=p@chr1:167603627..167603630,+ | |short_description=p@chr1:167603627..167603630,+ | ||
}} | }} |
Latest revision as of 00:03, 28 July 2015
Short description: | p@chr1:167603627..167603630, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:167603627..167603630, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.66e-27 | 14 |
lymphocyte of B lineage | 9.56e-16 | 24 |
pro-B cell | 9.56e-16 | 24 |
lymphocyte | 5.96e-11 | 53 |
common lymphoid progenitor | 5.96e-11 | 53 |
B-1 B cell | 1.56e-09 | 1 |
lymphoid lineage restricted progenitor cell | 7.46e-09 | 52 |
hematopoietic oligopotent progenitor cell | 1.86e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.86e-08 | 161 |
hematopoietic stem cell | 5.40e-08 | 168 |
hematopoietic cell | 1.88e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 2.77e-09 | 1 |
caecum | 2.77e-09 | 1 |
midgut | 2.77e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 1.56e-09 | 1 |
lymphosarcoma | 1.56e-09 | 1 |
acute leukemia | 2.55e-09 | 1 |