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FFCP PHASE1:Hg19::chr1:178006939..178006948,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=NA
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding
|HGNC=NA
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr1:178006939..178006948,-
|coexpression_cluster_id=C680
|coexpression_cluster_id=C680
|description=CAGE_peak_at_chr1:178006939..178006948,-
|description=CAGE_peak_at_chr1:178006939..178006948,-
Line 9: Line 14:
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019=CL:0002178;2.62e-23;3
|ontology_enrichment_celltype_v019=CL:0002178;2.62e-23;3
|ontology_enrichment_celltype_v019_2=CL:0002178,2.62e-23,3
|ontology_enrichment_development_v019=
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=DOID:4929!1.51e-07!2
|ontology_enrichment_disease=DOID:4929!1.51e-07!2
|ontology_enrichment_disease_v019=DOID:3493;5.04e-34;2!DOID:299;1.03e-11;25
|ontology_enrichment_disease_v019=DOID:3493;5.04e-34;2!DOID:299;1.03e-11;25
|ontology_enrichment_disease_v019_2=DOID:3493,5.04e-34,2;DOID:299,1.03e-11,25
|ontology_enrichment_uberon=UBERON:0007023!1.98e-22!115;UBERON:0001829!4.60e-08!2;UBERON:0005409!2.50e-07!35;UBERON:0000481!6.28e-07!347
|ontology_enrichment_uberon=UBERON:0007023!1.98e-22!115;UBERON:0001829!4.60e-08!2;UBERON:0005409!2.50e-07!35;UBERON:0000481!6.28e-07!347
|ontology_enrichment_uberon_v019=UBERON:0000945;1.40e-14;5!UBERON:0010039;1.40e-14;5!UBERON:0005409;1.33e-12;22!UBERON:0001155;1.21e-08;9!UBERON:0004921;5.64e-08;33!UBERON:0000059;2.63e-07;11
|ontology_enrichment_uberon_v019=UBERON:0000945;1.40e-14;5!UBERON:0010039;1.40e-14;5!UBERON:0005409;1.33e-12;22!UBERON:0001155;1.21e-08;9!UBERON:0004921;5.64e-08;33!UBERON:0000059;2.63e-07;11
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.77e-11,25;UBERON:0000945,1.24e-09,8;UBERON:0010039,1.24e-09,8;UBERON:0001155,1.21e-08,9;UBERON:0000059,2.63e-07,11
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|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357198913136319,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,1.83309043480088,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.426905989478705,0,4.46680293177729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0.0634158101939068,0,0.548257766857182,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.214429632529969,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,2.68219434960993,0,0.102662806856247,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0.490296643507811,0,0,0,0,0,0.187967835959707,0.257831551894309,0,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0,0.0636471582781649,0.202117188958219,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0.808426818959282,0,0.122241444182866,0,0,0,0
|short_description=p@chr1:178006939..178006948,-
|short_description=p@chr1:178006939..178006948,-
}}
}}

Latest revision as of 00:46, 28 July 2015

Short description:p@chr1:178006939..178006948, -
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr1:178006939..178006948, -
Coexpression cluster:C680_gastric_signet_pineal_tubular_medulloblastoma_small_anaplastic
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data