FFCP PHASE1:Hg19::chr1:183205712..183205723,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:183205712..183205723,+ | |||
|coexpression_cluster_id=C268 | |coexpression_cluster_id=C268 | ||
|description=CAGE_peak_at_chr1:183205712..183205723,+ | |description=CAGE_peak_at_chr1:183205712..183205723,+ | ||
|id=chr1:183205712..183205723,+ | |id=chr1:183205712..183205723,+ | ||
|ontology_enrichment_celltype=CL:0000066!9.30e-27!254;CL:0002076!1.27e-22!43;CL:0002159!8.25e-20!13;CL:0002368!1.50e-19!13;CL:0000223!6.13e-17!59;CL:0002166!2.17e-11!3;CL:0002328!7.00e-11!3;CL:0002621!1.49e-10!3;CL:0000220!3.41e-10!246;CL:0002321!4.88e-10!248;CL:0002202!3.17e-09!9;CL:0002632!3.17e-09!9;CL:0000240!4.52e-09!6;CL:0000311!4.52e-09!6;CL:0000079!4.52e-09!6;CL:0000237!4.52e-09!6;CL:0000036!4.52e-09!6;CL:0000357!4.52e-09!6;CL:0000114!4.52e-09!6;CL:0000244!1.05e-08!4;CL:0000731!1.05e-08!4;CL:0002327!2.51e-08!4;CL:0002077!3.03e-08!33;CL:0002536!1.67e-07!2;CL:0000575!2.03e-07!2;CL:0000362!5.02e-07!8;CL:0000076!6.45e-07!62;CL:0000312!8.41e-07!5;CL:0000063!9.08e-07!578 | |ontology_enrichment_celltype=CL:0000066!9.30e-27!254;CL:0002076!1.27e-22!43;CL:0002159!8.25e-20!13;CL:0002368!1.50e-19!13;CL:0000223!6.13e-17!59;CL:0002166!2.17e-11!3;CL:0002328!7.00e-11!3;CL:0002621!1.49e-10!3;CL:0000220!3.41e-10!246;CL:0002321!4.88e-10!248;CL:0002202!3.17e-09!9;CL:0002632!3.17e-09!9;CL:0000240!4.52e-09!6;CL:0000311!4.52e-09!6;CL:0000079!4.52e-09!6;CL:0000237!4.52e-09!6;CL:0000036!4.52e-09!6;CL:0000357!4.52e-09!6;CL:0000114!4.52e-09!6;CL:0000244!1.05e-08!4;CL:0000731!1.05e-08!4;CL:0002327!2.51e-08!4;CL:0002077!3.03e-08!33;CL:0002536!1.67e-07!2;CL:0000575!2.03e-07!2;CL:0000362!5.02e-07!8;CL:0000076!6.45e-07!62;CL:0000312!8.41e-07!5;CL:0000063!9.08e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000244;6.72e-38;4!CL:0000731;6.72e-38;4!CL:0002166;3.89e-23;3!CL:0002159;2.87e-19;14!CL:0000312;3.36e-14;5!CL:0000240;5.37e-12;6!CL:0000311;5.37e-12;6!CL:0000079;5.37e-12;6!CL:0000237;5.37e-12;6!CL:0000362;2.65e-08;9!CL:0002077;2.35e-07;34!CL:0002328;7.08e-07;3!CL:0002231;9.37e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,6.73e-38,4;CL:0000731,6.73e-38,4;CL:0002166,3.29e-23,3;CL:0002159,2.81e-19,14;CL:0000312,3.60e-14,5;CL:0000240,5.68e-12,6;CL:0000311,5.68e-12,6;CL:0000079,5.68e-12,6;CL:0000237,5.68e-12,6;CL:0000036,5.68e-12,6;CL:0000357,5.68e-12,6;CL:0000114,5.68e-12,6;CL:0000066,1.64e-08,253;CL:0000362,2.75e-08,9;CL:0002077,3.98e-08,34;CL:0002328,6.88e-07,3;CL:0002231,8.15e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000357;5.37e-12;6!CL:0000114;5.37e-12;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4468;1.64e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.71e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000365!3.83e-11!5;UBERON:0004815!7.00e-11!3;UBERON:0002031!7.00e-11!3;UBERON:0001949!1.49e-10!3;UBERON:0005910!2.78e-09!6;UBERON:0001708!1.26e-08!4;UBERON:0001704!1.26e-08!4;UBERON:0001911!2.51e-08!4;UBERON:0005333!2.51e-08!4;UBERON:0008425!2.51e-08!4;UBERON:0005311!2.51e-08!4;UBERON:0002185!2.98e-08!4 | |ontology_enrichment_uberon=UBERON:0000365!3.83e-11!5;UBERON:0004815!7.00e-11!3;UBERON:0002031!7.00e-11!3;UBERON:0001949!1.49e-10!3;UBERON:0005910!2.78e-09!6;UBERON:0001708!1.26e-08!4;UBERON:0001704!1.26e-08!4;UBERON:0001911!2.51e-08!4;UBERON:0005333!2.51e-08!4;UBERON:0008425!2.51e-08!4;UBERON:0005311!2.51e-08!4;UBERON:0002185!2.98e-08!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.73e-30;5!UBERON:0005910;1.53e-25;6!UBERON:0001708;1.28e-17;4!UBERON:0008895;1.28e-17;4!UBERON:0011159;2.66e-14;5!UBERON:0000486;4.01e-13;12!UBERON:0011137;5.39e-07;11!UBERON:0010323;5.39e-07;11!UBERON:0004815;7.08e-07;3!UBERON:0002031;7.08e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.73e-30,5;UBERON:0005910,1.53e-25,6;UBERON:0001708,1.13e-17,4;UBERON:0008895,1.13e-17,4;UBERON:0011159,2.41e-14,5;UBERON:0010188,4.07e-12,6;UBERON:0002539,4.07e-12,6;UBERON:0008816,4.07e-12,6;UBERON:0010323,5.15e-07,11;UBERON:0004815,6.88e-07,3;UBERON:0002031,6.88e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.873765488520689,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548751427043128,1.1240175325762,2.31216636546751,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0.93733833986777,5.71139235876122,1.55952606966625,1.16426079513703,0.871901815541886,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60405176242628,0.552485933615378,0,0,0,0,0.0770153371044148,0,0,0.527758144464379,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.661139661443912,2.11409074101617,0.382838137483752,0.809262246844399,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769776901804097,0.670302275535787,0,0,1.29151611801369,0,2.21715076768338,4.59446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,1.26598838716816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0.926404341482917,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828864656652147,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.873765488520689,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548751427043128,1.1240175325762,2.31216636546751,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0.93733833986777,5.71139235876122,1.55952606966625,1.16426079513703,0.871901815541886,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60405176242628,0.552485933615378,0,0,0,0,0.0770153371044148,0,0,0.527758144464379,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.661139661443912,2.11409074101617,0.382838137483752,0.809262246844399,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769776901804097,0.670302275535787,0,0,1.29151611801369,0,2.21715076768338,4.59446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,1.26598838716816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0.926404341482917,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828864656652147,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:183205712..183205723,+ | |short_description=p@chr1:183205712..183205723,+ | ||
}} | }} |
Latest revision as of 01:09, 28 July 2015
Short description: | p@chr1:183205712..183205723, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:183205712..183205723, + |
Coexpression cluster: | C268_Mallassezderived_Urothelial_Gingival_Small_Bronchial_Tracheal_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 6.73e-38 | 4 |
urothelial cell | 6.73e-38 | 4 |
epithelial cell of Malassez | 3.29e-23 | 3 |
general ecto-epithelial cell | 2.81e-19 | 14 |
keratinocyte | 3.60e-14 | 5 |
stratified squamous epithelial cell | 5.68e-12 | 6 |
keratin accumulating cell | 5.68e-12 | 6 |
stratified epithelial cell | 5.68e-12 | 6 |
keratinizing barrier epithelial cell | 5.68e-12 | 6 |
epithelial fate stem cell | 5.68e-12 | 6 |
stratified epithelial stem cell | 5.68e-12 | 6 |
surface ectodermal cell | 5.68e-12 | 6 |
epithelial cell | 1.64e-08 | 253 |
epidermal cell | 2.75e-08 | 9 |
ecto-epithelial cell | 3.98e-08 | 34 |
bronchial epithelial cell | 6.88e-07 | 3 |
epithelial cell of prostate | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.73e-30 | 5 |
transitional epithelium | 1.53e-25 | 6 |
jaw skeleton | 1.13e-17 | 4 |
splanchnocranium | 1.13e-17 | 4 |
primary subdivision of cranial skeletal system | 2.41e-14 | 5 |
protuberance | 4.07e-12 | 6 |
pharyngeal arch | 4.07e-12 | 6 |
embryonic head | 4.07e-12 | 6 |
cranial skeletal system | 5.15e-07 | 11 |
lower respiratory tract epithelium | 6.88e-07 | 3 |
epithelium of bronchus | 6.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.71e-09 | 2 |