FFCP PHASE1:Hg19::chr1:203317232..203317258,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:203317232..203317258,+
|short_description=p@chr1:203317232..203317258,+
|description=CAGE_peak_at_chr1:203317232..203317258,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:203317232..203317258,+ | |||
|coexpression_cluster_id=C546 | |||
|description=CAGE_peak_at_chr1:203317232..203317258,+ | |||
|id=chr1:203317232..203317258,+ | |||
|ontology_enrichment_celltype=CL:0000136!1.26e-10!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.89e-15;13!CL:0002615;6.63e-11;3!CL:0002579;3.69e-10;3!CL:0000153;2.63e-09;9!CL:0000447;2.63e-09;9!CL:0002334;1.03e-08;12!CL:0002617;8.33e-08;2!CL:0000327;1.98e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,5.27e-13,15;CL:0002615,6.34e-11,3;CL:0002579,5.67e-10,3;CL:0000153,2.66e-09,9;CL:0000447,2.66e-09,9;CL:0002334,1.02e-08,12;CL:0002617,9.55e-08,2;CL:0000327,2.01e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.56e-18!115;UBERON:0004457!2.54e-09!12;UBERON:0000042!2.54e-09!12;UBERON:0003688!2.02e-08!6;UBERON:0002358!2.02e-08!6;UBERON:0003684!2.02e-08!6;UBERON:0001178!2.02e-08!6;UBERON:0007100!6.74e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.03e-22;9!UBERON:0000042;2.03e-22;9!UBERON:0003688;2.47e-19;6!UBERON:0002358;2.47e-19;6!UBERON:0003684;2.47e-19;6!UBERON:0001178;2.47e-19;6!UBERON:0003127;1.37e-07;2!UBERON:0000341;2.23e-07;2!UBERON:0001443;3.40e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.66e-19,6;UBERON:0002358,3.66e-19,6;UBERON:0003684,3.66e-19,6;UBERON:0001178,3.66e-19,6;UBERON:0004457,2.24e-16,12;UBERON:0000042,2.24e-16,12;UBERON:0003127,2.09e-07,2;UBERON:0000341,2.98e-07,2;UBERON:0001443,3.10e-07,11;UBERON:0004458,6.32e-07,49 | |||
|phase1_expression=3.08853244759946,3.42560838225573,3.94672331468719,2.00146596706261,6.70441641640932,0.872338524100369,0,0.631719873426831,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,0.639312809217652,0.361439152384566,2.00535164254356,3.33146993609895,0.795285947051099,45.7436778084478,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0.560677600142307,0,0,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,1.18800285728205,0.989067717114227,0,0,0,0,0,0,0.30648779579902,1.50238058906597,0,0,0.213557388818567,0.211931901159562,0,0,0,0.18611685633159,0.168776332241266,0,0.252433774244115,0,0.323292113637624,0,0,0,0.193260853163297,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,1.71573592389777,0,0,0,0.355391948742546,0,0.301439377059586,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,1.45579603071565,0.356857977594324,0.788512075169673,1.28855556491985,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,1.99500565274481,1.40330047216537,2.56278298511402,1.02341449813341,2.57366273829772,1.48418066444991,0,0.177561725313127,0,0,0,0,0.200506470303285,0,0,0,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0,0,0,0,0,4.64436797654861,2.96365403663912,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,8.36841550654493,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0.591860433821602,0,0,0,0.0927680981618513,0,0,0.174919999992391,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38510465306835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,1.99052386215701,0.353830258013357,1.83309043480088,0,0,0,0.067401132980677,4.01288823649394,0,0,0,0,0.394584402849391,3.62972148145992,0,3.09614240179591,0,0,0,0,0,0,0,0,0,0,0,1.7472666824203,0,0,0,0,0.484945082442097,0,5.42353777873278,0,0,0,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,10.8920136496179,1.60412296808179,0.717873024576814,0.599037001496973,1.28767814440971,0.669514372325618,0.335917362433631,1.44119953416961,1.16495949527454,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.394028536495991,0.524545881349981,0,0,0,0,0.662091970365432,0,0,0.864221491201268,0,0,0,0,0.226624183040251,0.293104467356165,0,0,0.13223260174269,0,0,0.427149650270779,0.157204305099666,0.828478110694391,1.48849806543585,0.592834895693833,0,0,3.26410682021684,0.5013797880454,3.06345576763462,1.63936315354902,0,0,0,0,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0.754703705257725,0,0,0.302461847526478,0,0,0,0.899606224327209,0,0,0,0.521745061811734,0.601030435988874,0.380805212168795,0.406870733204662,0.181848659202559,0.214821114084977,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,1.1441462864015,0,1.98916222116275,1.50420656698514,0.20170506870352,2.34454203369928,0,0,0,0,0,0,0,0,3.83780436800028,0.496211178389294,0,0,0,0.336283722218824,0.606965604236632,0.227662191351298,0.79832133146375,0,0.171488009437418,0.135939465953663,0,0,0,0.470958557103084,0,0,3.65263488203798,0,0,1.35805433935647,0,0,0,0,0,0,0,0.430227358820278,0.118332000730565,0,0,0,0,0,0,0,0,0,0.205325613712494,4.6392577253528,0.971421986118279,0,0,0,0,0,0,0.0771741581079447,1.74847648403166,0,1.71603825227734,0,0.196308467114945,0,4.6492130034174,0.679708458751268,0.281951753939561,0.193373663920732,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0.0679914901909147,0,2.645134202577,0.743990036333503,2.77305377178851,0.432626562123789,0,0,12.2897545981094,0,0,0,0,0.227336094654718,0,0,0,1.27940389140589,3.33290204049236,0,0.124149428591716,0,0.891060215894309,3.43599221228973,0.653150243690884,0,0.404112318087525,1.07583308089015,10.9777917660184,0,0,0,0,18.7712753922763,0.855690109280065,4.88275413978886,0,0.402547587182052,0 | |phase1_expression=3.08853244759946,3.42560838225573,3.94672331468719,2.00146596706261,6.70441641640932,0.872338524100369,0,0.631719873426831,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,0.639312809217652,0.361439152384566,2.00535164254356,3.33146993609895,0.795285947051099,45.7436778084478,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0.560677600142307,0,0,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,1.18800285728205,0.989067717114227,0,0,0,0,0,0,0.30648779579902,1.50238058906597,0,0,0.213557388818567,0.211931901159562,0,0,0,0.18611685633159,0.168776332241266,0,0.252433774244115,0,0.323292113637624,0,0,0,0.193260853163297,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,1.71573592389777,0,0,0,0.355391948742546,0,0.301439377059586,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,1.45579603071565,0.356857977594324,0.788512075169673,1.28855556491985,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,1.99500565274481,1.40330047216537,2.56278298511402,1.02341449813341,2.57366273829772,1.48418066444991,0,0.177561725313127,0,0,0,0,0.200506470303285,0,0,0,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0,0,0,0,0,4.64436797654861,2.96365403663912,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,8.36841550654493,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0.591860433821602,0,0,0,0.0927680981618513,0,0,0.174919999992391,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38510465306835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,1.99052386215701,0.353830258013357,1.83309043480088,0,0,0,0.067401132980677,4.01288823649394,0,0,0,0,0.394584402849391,3.62972148145992,0,3.09614240179591,0,0,0,0,0,0,0,0,0,0,0,1.7472666824203,0,0,0,0,0.484945082442097,0,5.42353777873278,0,0,0,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,10.8920136496179,1.60412296808179,0.717873024576814,0.599037001496973,1.28767814440971,0.669514372325618,0.335917362433631,1.44119953416961,1.16495949527454,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.394028536495991,0.524545881349981,0,0,0,0,0.662091970365432,0,0,0.864221491201268,0,0,0,0,0.226624183040251,0.293104467356165,0,0,0.13223260174269,0,0,0.427149650270779,0.157204305099666,0.828478110694391,1.48849806543585,0.592834895693833,0,0,3.26410682021684,0.5013797880454,3.06345576763462,1.63936315354902,0,0,0,0,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0.754703705257725,0,0,0.302461847526478,0,0,0,0.899606224327209,0,0,0,0.521745061811734,0.601030435988874,0.380805212168795,0.406870733204662,0.181848659202559,0.214821114084977,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,1.1441462864015,0,1.98916222116275,1.50420656698514,0.20170506870352,2.34454203369928,0,0,0,0,0,0,0,0,3.83780436800028,0.496211178389294,0,0,0,0.336283722218824,0.606965604236632,0.227662191351298,0.79832133146375,0,0.171488009437418,0.135939465953663,0,0,0,0.470958557103084,0,0,3.65263488203798,0,0,1.35805433935647,0,0,0,0,0,0,0,0.430227358820278,0.118332000730565,0,0,0,0,0,0,0,0,0,0.205325613712494,4.6392577253528,0.971421986118279,0,0,0,0,0,0,0.0771741581079447,1.74847648403166,0,1.71603825227734,0,0.196308467114945,0,4.6492130034174,0.679708458751268,0.281951753939561,0.193373663920732,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0.0679914901909147,0,2.645134202577,0.743990036333503,2.77305377178851,0.432626562123789,0,0,12.2897545981094,0,0,0,0,0.227336094654718,0,0,0,1.27940389140589,3.33290204049236,0,0.124149428591716,0,0.891060215894309,3.43599221228973,0.653150243690884,0,0.404112318087525,1.07583308089015,10.9777917660184,0,0,0,0,18.7712753922763,0.855690109280065,4.88275413978886,0,0.402547587182052,0 | ||
|short_description=p@chr1:203317232..203317258,+ | |||
}} | }} |
Latest revision as of 02:29, 28 July 2015
Short description: | p@chr1:203317232..203317258, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:203317232..203317258, + |
Coexpression cluster: | C546_Chondrocyte_heart_mature_Adipocyte_teratocarcinoma_aorta_dura |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 5.27e-13 | 15 |
adipocyte of omentum tissue | 6.34e-11 | 3 |
omentum preadipocyte | 5.67e-10 | 3 |
GAG secreting cell | 2.66e-09 | 9 |
carbohydrate secreting cell | 2.66e-09 | 9 |
preadipocyte | 1.02e-08 | 12 |
adipocyte of breast | 9.55e-08 | 2 |
extracellular matrix secreting cell | 2.01e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.66e-19 | 6 |
peritoneum | 3.66e-19 | 6 |
abdominal cavity | 3.66e-19 | 6 |
visceral peritoneum | 3.66e-19 | 6 |
cavity lining | 2.24e-16 | 12 |
serous membrane | 2.24e-16 | 12 |
open tracheal system trachea | 2.09e-07 | 2 |
throat | 2.98e-07 | 2 |
chest | 3.10e-07 | 11 |
body cavity or lining | 6.32e-07 | 49 |