FFCP PHASE1:Hg19::chr1:209741112..209741127,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-94bp_to_ENST00000424696_5end | |association_with_transcript=-94bp_to_ENST00000424696_5end | ||
|cluster_id=chr1:209741112..209741127,- | |||
|coexpression_cluster_id=C458 | |||
|description=CAGE_peak_1_at_ENST00000424696_5end | |description=CAGE_peak_1_at_ENST00000424696_5end | ||
|id=chr1:209741112..209741127,- | |id=chr1:209741112..209741127,- | ||
|ontology_enrichment_celltype=CL:0002076!1.39e-14!43;CL:0000066!4.18e-11!254;CL:0000223!1.12e-09!59;CL:0002251!1.32e-09!21;CL:0000622!1.99e-09!5;CL:0000154!9.92e-08!6;CL:0002159!1.66e-07!13;CL:0002368!9.54e-07!13 | |ontology_enrichment_celltype=CL:0002076!1.39e-14!43;CL:0000066!4.18e-11!254;CL:0000223!1.12e-09!59;CL:0002251!1.32e-09!21;CL:0000622!1.99e-09!5;CL:0000154!9.92e-08!6;CL:0002159!1.66e-07!13;CL:0002368!9.54e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000622;8.36e-22;5!CL:0000154;3.95e-18;6!CL:0002251;1.38e-16;20!CL:0002076;1.07e-15;42!CL:0002623;1.42e-14;3!CL:0002159;7.98e-14;14!CL:0002166;8.92e-14;3!CL:0000150;5.42e-12;9!CL:0002554;1.38e-09;2!CL:0000317;5.34e-09;2!CL:1000448;5.34e-09;2!CL:0002308;5.34e-09;2!CL:0002140;5.34e-09;2!CL:0000362;2.00e-07;9!CL:0002077;2.54e-07;34!CL:0000240;5.53e-07;6!CL:0000311;5.53e-07;6!CL:0000079;5.53e-07;6!CL:0000237;5.53e-07;6!CL:0002577;9.33e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,1.40e-21,5;CL:0000154,6.06e-18,6;CL:0002076,2.49e-17,42;CL:0002251,1.24e-16,20;CL:0002623,1.49e-14,3;CL:0002166,8.57e-14,3;CL:0000066,8.92e-14,253;CL:0002159,9.59e-14,14;CL:0000150,7.17e-12,9;CL:0000223,1.14e-11,58;CL:0002554,9.40e-10,2;CL:0000317,8.41e-09,2;CL:1000448,8.41e-09,2;CL:0002308,8.41e-09,2;CL:0002140,8.41e-09,2;CL:0002077,2.74e-08,34;CL:0000362,2.38e-07,9;CL:0000076,4.69e-07,63;CL:0000240,5.37e-07,6;CL:0000311,5.37e-07,6;CL:0000079,5.37e-07,6;CL:0000237,5.37e-07,6;CL:0000036,5.37e-07,6;CL:0000357,5.37e-07,6;CL:0000114,5.37e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000357;5.53e-07;6!CL:0000114;5.53e-07;6 | |||
|ontology_enrichment_disease=DOID:1749!1.65e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;9.28e-14;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,7.53e-14,14 | |||
|ontology_enrichment_uberon=UBERON:0003100!1.11e-08!41;UBERON:0005795!7.21e-08!22;UBERON:0003134!1.51e-07!37;UBERON:0000474!1.51e-07!37;UBERON:0003102!2.82e-07!95;UBERON:0000995!6.23e-07!21 | |ontology_enrichment_uberon=UBERON:0003100!1.11e-08!41;UBERON:0005795!7.21e-08!22;UBERON:0003134!1.51e-07!37;UBERON:0000474!1.51e-07!37;UBERON:0003102!2.82e-07!95;UBERON:0000995!6.23e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0001708;1.91e-10;4!UBERON:0008895;1.91e-10;4!UBERON:0002419;5.34e-09;2!UBERON:0007771;5.34e-09;2!UBERON:0003297;5.34e-09;2!UBERON:0001821;5.34e-09;2!UBERON:0003487;5.34e-09;2!UBERON:0001820;5.34e-09;2!UBERON:0000165;5.57e-09;28!UBERON:0011159;1.94e-08;5!UBERON:0000161;4.77e-08;19!UBERON:0000166;4.77e-08;19!UBERON:0001041;9.56e-08;14!UBERON:0001044;1.75e-07;6!UBERON:0003293;1.75e-07;6!UBERON:0003294;1.75e-07;6!UBERON:0010047;1.75e-07;6!UBERON:0003408;1.75e-07;6!UBERON:0000167;1.75e-07;6!UBERON:0000974;4.99e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,1.85e-10,4;UBERON:0008895,1.85e-10,4;UBERON:0000166,4.30e-09,22;UBERON:0002419,8.41e-09,2;UBERON:0007771,8.41e-09,2;UBERON:0003297,8.41e-09,2;UBERON:0001821,8.41e-09,2;UBERON:0003487,8.41e-09,2;UBERON:0001820,8.41e-09,2;UBERON:0005089,8.41e-09,2;UBERON:0005088,8.41e-09,2;UBERON:0003102,1.12e-08,99;UBERON:0000165,1.14e-08,29;UBERON:0000930,1.14e-08,29;UBERON:0011159,1.89e-08,5;UBERON:0000161,2.08e-08,36;UBERON:0000153,9.55e-08,62;UBERON:0007811,9.55e-08,62;UBERON:0001044,1.80e-07,6;UBERON:0003293,1.80e-07,6;UBERON:0003294,1.80e-07,6;UBERON:0010047,1.80e-07,6;UBERON:0000167,1.80e-07,6;UBERON:0000033,2.14e-07,56;UBERON:0010188,4.18e-07,6;UBERON:0002539,4.18e-07,6;UBERON:0008816,4.18e-07,6 | |||
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| ||
|short_description=p1@ENST00000424696 | |short_description=p1@ENST00000424696 | ||
}} | }} |
Latest revision as of 03:19, 28 July 2015
Short description: | p1@ENST00000424696 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000424696_5end |
Coexpression cluster: | C458_salivary_parietal_middle_locus_medial_occipital_globus |
Association with transcript: | -94bp_to_ENST00000424696_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 1.40e-21 | 5 |
protein secreting cell | 6.06e-18 | 6 |
endo-epithelial cell | 2.49e-17 | 42 |
epithelial cell of alimentary canal | 1.24e-16 | 20 |
acinar cell of salivary gland | 1.49e-14 | 3 |
epithelial cell of Malassez | 8.57e-14 | 3 |
epithelial cell | 8.92e-14 | 253 |
general ecto-epithelial cell | 9.59e-14 | 14 |
glandular epithelial cell | 7.17e-12 | 9 |
endodermal cell | 1.14e-11 | 58 |
fibroblast of lymphatic vessel | 9.40e-10 | 2 |
sebum secreting cell | 8.41e-09 | 2 |
epithelial cell of sweat gland | 8.41e-09 | 2 |
epithelial cell of skin gland | 8.41e-09 | 2 |
acinar cell of sebaceous gland | 8.41e-09 | 2 |
ecto-epithelial cell | 2.74e-08 | 34 |
epidermal cell | 2.38e-07 | 9 |
squamous epithelial cell | 4.69e-07 | 63 |
stratified squamous epithelial cell | 5.37e-07 | 6 |
keratin accumulating cell | 5.37e-07 | 6 |
stratified epithelial cell | 5.37e-07 | 6 |
keratinizing barrier epithelial cell | 5.37e-07 | 6 |
epithelial fate stem cell | 5.37e-07 | 6 |
stratified epithelial stem cell | 5.37e-07 | 6 |
surface ectodermal cell | 5.37e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 1.85e-10 | 4 |
splanchnocranium | 1.85e-10 | 4 |
oral opening | 4.30e-09 | 22 |
skin gland | 8.41e-09 | 2 |
epidermis gland | 8.41e-09 | 2 |
gland of integumental system | 8.41e-09 | 2 |
sebaceous gland | 8.41e-09 | 2 |
skin sebaceous gland | 8.41e-09 | 2 |
sweat gland | 8.41e-09 | 2 |
sweat gland placode | 8.41e-09 | 2 |
sebaceous gland placode | 8.41e-09 | 2 |
surface structure | 1.12e-08 | 99 |
mouth | 1.14e-08 | 29 |
stomodeum | 1.14e-08 | 29 |
primary subdivision of cranial skeletal system | 1.89e-08 | 5 |
orifice | 2.08e-08 | 36 |
anterior region of body | 9.55e-08 | 62 |
craniocervical region | 9.55e-08 | 62 |
saliva-secreting gland | 1.80e-07 | 6 |
gland of oral region | 1.80e-07 | 6 |
gland of foregut | 1.80e-07 | 6 |
oral gland | 1.80e-07 | 6 |
oral cavity | 1.80e-07 | 6 |
head | 2.14e-07 | 56 |
protuberance | 4.18e-07 | 6 |
pharyngeal arch | 4.18e-07 | 6 |
embryonic head | 4.18e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 7.53e-14 | 14 |