FFCP PHASE1:Hg19::chr1:225839717..225839724,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:225839717..225839724,- | |||
|description=CAGE_peak_at_chr1:225839717..225839724,- | |description=CAGE_peak_at_chr1:225839717..225839724,- | ||
|id=chr1:225839717..225839724,- | |id=chr1:225839717..225839724,- | ||
|ontology_enrichment_celltype=CL:0000055!8.52e-12!180;CL:0002319!6.90e-08!25;CL:0000133!2.59e-07!59 | |ontology_enrichment_celltype=CL:0000055!8.52e-12!180;CL:0002319!6.90e-08!25;CL:0000133!2.59e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000515;1.61e-11;3!CL:0000138;4.98e-10;6!CL:0002319;3.18e-09;25!CL:0002617;6.98e-09;2!CL:0000056;9.52e-09;4!CL:0000095;2.84e-08;17!CL:0000243;5.45e-07;15!CL:0000125;5.45e-07;15 | |ontology_enrichment_celltype_v019=CL:0000515;1.61e-11;3!CL:0000138;4.98e-10;6!CL:0002319;3.18e-09;25!CL:0002617;6.98e-09;2!CL:0000056;9.52e-09;4!CL:0000095;2.84e-08;17!CL:0000243;5.45e-07;15!CL:0000125;5.45e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000058,4.79e-10,6;CL:0000138,4.79e-10,6;CL:0002319,2.60e-09,25;CL:0002617,7.02e-09,2;CL:0000515,8.60e-09,4;CL:0000095,2.54e-08,17;CL:0000123,2.54e-08,17;CL:0000243,5.83e-07,15;CL:0000125,5.83e-07,15;CL:0000030,5.83e-07,15;CL:0000339,5.83e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006238;3.74e-11;10!CL:0000515;9.52e-09;4!CL:0000339;5.45e-07;15 | |ontology_enrichment_development_v019=UBERON:0006238;3.74e-11;10!CL:0000515;9.52e-09;4!CL:0000339;5.45e-07;15 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3093;3.59e-10;11 | |ontology_enrichment_disease_v019=DOID:3093;3.59e-10;11 | ||
|ontology_enrichment_disease_v019_2=DOID:3093,3.97e-10,11 | |||
|ontology_enrichment_uberon=UBERON:0004457!9.26e-07!12;UBERON:0000042!9.26e-07!12 | |ontology_enrichment_uberon=UBERON:0004457!9.26e-07!12;UBERON:0000042!9.26e-07!12 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=3.08853244759946,3.63970890614671,0.986680828671798,3.00219895059391,0.893922188854576,0,5.06599756336621,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0.369363174230364,0,0.313454721478088,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,2.1686349143074,2.00535164254356,1.44846518960824,1.5905718941022,0.486634870302636,0.472674085820339,0.886917589850256,0.527008714158756,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633152558322899,1.32409180813219,0.860509862246441,0.354668382198357,0.560677600142307,1.06748995729705,0.74000264525148,0,0.134710672069688,0.326923806226917,0.454072282934794,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0.247266929278557,0,0,0,0,0,0,0.612975591598039,0.150238058906597,0.453728732640084,0.179389635688862,0.213557388818567,0,0.300091096084402,0.206105058476878,0.257640540045629,0,1.68776332241266,0.779496041289589,0.252433774244115,0,0.484938170456436,0.355009592516614,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0.72995471815166,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0.110293972732394,0,0,0.269662616320329,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0.0925884451585296,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,1.34385702559088,1.13420077793909,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0.517086863031111,0,0,0.531876233169741,0,0.514414748524284,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,1.74306691720059,0.099972991182057,0,0,0,5.75099653179798,2.29723871668228,0,2.31650090668127,1.2328579353023,1.61154866915906,0,0,0,0,9.14740647200868,0,0,0.670065061337395,0,0,0,0,0.24538298343828,0,0,0.415941723061614,0.713715955188647,0.473107245101804,0.35142424497814,1.20378439891088,0,0,1.99267679560631,0.368738337083406,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0.744323423456331,5.98501695823444,1.12264037773229,1.28139149255701,0.511707249066704,0.64341568457443,0,0.154209693802656,0,0.0821271560138091,0,0.232420756919918,0,0.200506470303285,0,0,0.546273504020151,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.206082023295445,0.27470839445503,0.495056999523528,0,0,0,0.096670718292122,0.924291702687866,0,0,0.107420244868274,0.145016693914229,0.170453254832202,0.0890320356467374,0,0.192190067365106,0,0.10115778085555,0,0.62962469366128,0.6970372701606,0.308033580176089,0,0,0,0.143124886741991,0.372158369359667,0.632758849437452,0.38126038784765,0.767693373934002,0,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,1.05650146756755,0,0.141405431953713,0,1.10273068709225,0.66343897524122,0,0,0,0,0,0.281695602532241,0,0.294747123039363,0.35667105148125,0,0.422215270595328,0.987884678879706,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0.597743964753209,0,0.251932747854276,1.63629892003448,0,0,0,0,0,0.197286811273867,0,2.22273980289274,0,0,0,0,0.0874599999961957,0,0.910347586283997,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.0769502585037971,1.36730467016401,0.23056390438806,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0.134802265961354,0.802577647298789,0,0,0,0,1.57833761139756,0,0.30607276163049,0.821425535170343,0.450970258243478,0.414752765588989,0,0,0,0,0,0,0,0.0979923974143777,0,0.34945333648406,6.87944129886466,0.0967563312890851,0.0730893170861856,0,0,0,0,0,0,0.0633107959558787,0,0,0.640358984218058,0,0,0.458146384663663,0,0,0,0,1.22313785466253,1.35983700206033,1.63197148218115,0.866851769704557,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0.134366944973453,0.720599767084807,0,0.315132729228895,0.659326867049332,0.202210631562555,0.0984274815147488,0,0,0.136203406111576,0.482259445395058,0.825236619583403,1.66176135211674,0,0,0.0607495566580247,0.670869375198532,0,0,0,0.179287339332845,0,0.714695326373367,0,13.221963958047,0,1.72844298240254,0,0,0,0.340776043570843,0,0,0,0.258565912723101,0.66116300871345,0.342173675768659,0,0.213574825135389,0.314408610199332,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0.244052529803926,0,0,0.110929051536852,0.0620964029413835,1.10678907948985,0.124980407962107,0,0,0,1.87333962322753,0.28984205722165,0.895528817321244,0.233713309847224,0,1.13641803165053,4.77979013329893,1.77962244319307,0,0.151230923763239,0.310874401165561,1.18284119991707,0.477890301491107,0.449803112163605,0.465788870628778,0,0,0.521745061811734,0.150257608997218,0.380805212168795,0.406870733204662,0.727394636810238,0.107410557042488,0,1.59238355479446,0.800055529326307,1.03018711554838,0.673498977531838,6.30924491143255,0,0,0,0,0,0.244736704506468,0,0,0.21928404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| ||
|short_description=p@chr1:225839717..225839724,- | |short_description=p@chr1:225839717..225839724,- | ||
}} | }} |
Latest revision as of 04:29, 28 July 2015
Short description: | p@chr1:225839717..225839724, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:225839717..225839724, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 4.79e-10 | 6 |
chondrocyte | 4.79e-10 | 6 |
neural cell | 2.60e-09 | 25 |
adipocyte of breast | 7.02e-09 | 2 |
skeletal muscle myoblast | 8.60e-09 | 4 |
neuron associated cell | 2.54e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 2.54e-08 | 17 |
glial cell (sensu Vertebrata) | 5.83e-07 | 15 |
glial cell | 5.83e-07 | 15 |
glioblast | 5.83e-07 | 15 |
glioblast (sensu Vertebrata) | 5.83e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 3.97e-10 | 11 |