FFCP PHASE1:Hg19::chr1:236895237..236895246,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr1:236895237..236895246,+ to FFCP PHASE1:Hg19::chr1:236895237..236895246,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:236895237..236895246,+ | |||
|coexpression_cluster_id=C90 | |||
|description=CAGE_peak_at_chr1:236895237..236895246,+ | |||
|id=chr1:236895237..236895246,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.83e-14;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:114!1.21e-12!2;DOID:171!5.68e-10!10;DOID:178!5.78e-07!1;DOID:326!5.78e-07!1;DOID:3978!5.78e-07!1;DOID:3394!5.78e-07!1;DOID:5844!5.78e-07!1;DOID:1287!9.76e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:171;1.10e-59;10!DOID:3095;7.08e-28;22!DOID:2994;7.08e-28;22!DOID:169;2.74e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.10e-59,10;DOID:3095,7.08e-28,22;DOID:2994,7.08e-28,22;DOID:169,2.74e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!8.90e-19!57;UBERON:0005068!8.90e-19!57;UBERON:0006241!8.90e-19!57;UBERON:0007135!8.90e-19!57;UBERON:0000349!1.68e-18!5;UBERON:0002298!2.33e-17!8;UBERON:0002346!1.65e-16!90;UBERON:0002616!3.24e-13!59;UBERON:0003076!4.29e-13!15;UBERON:0003057!4.29e-13!15;UBERON:0001954!7.11e-13!2;UBERON:0003022!7.11e-13!2;UBERON:0002421!7.11e-13!2;UBERON:0002600!7.11e-13!2;UBERON:0007023!4.17e-12!115;UBERON:0002791!4.96e-12!33;UBERON:0001017!5.18e-12!82;UBERON:0001893!1.20e-11!34;UBERON:0000073!1.28e-11!94;UBERON:0001016!1.28e-11!94;UBERON:0002020!1.48e-11!34;UBERON:0003528!1.48e-11!34;UBERON:0003075!1.71e-11!86;UBERON:0007284!1.71e-11!86;UBERON:0005743!2.50e-11!86;UBERON:0000955!8.93e-11!69;UBERON:0006238!8.93e-11!69;UBERON:0002420!3.12e-10!9;UBERON:0007245!3.12e-10!9;UBERON:0010009!3.12e-10!9;UBERON:0010011!3.12e-10!9;UBERON:0000454!3.12e-10!9;UBERON:0002308!3.27e-10!9;UBERON:0000125!3.27e-10!9;UBERON:0002780!1.84e-09!41;UBERON:0001890!1.84e-09!41;UBERON:0006240!1.84e-09!41;UBERON:0003080!3.29e-09!42;UBERON:0002240!7.78e-09!3;UBERON:0006331!1.62e-08!3;UBERON:0000988!2.03e-08!3;UBERON:0001896!2.75e-08!3;UBERON:0005290!2.75e-08!3;UBERON:0010096!2.75e-08!3;UBERON:0009663!7.88e-08!7;UBERON:0000924!9.51e-08!173;UBERON:0006601!9.51e-08!173;UBERON:0004733!1.39e-07!12;UBERON:0002028!1.39e-07!12;UBERON:0007277!1.39e-07!12;UBERON:0001869!1.64e-07!32;UBERON:0002426!1.75e-07!1;UBERON:0003831!1.75e-07!1;UBERON:0003898!1.75e-07!1;UBERON:0004830!1.75e-07!1;UBERON:0001774!1.75e-07!1;UBERON:0003830!1.75e-07!1;UBERON:0005175!1.75e-07!1;UBERON:0003897!1.75e-07!1;UBERON:0001103!1.75e-07!1;UBERON:0010084!1.75e-07!1;UBERON:0000989!2.23e-07!1;UBERON:0008811!2.23e-07!1;UBERON:0006258!2.23e-07!1;UBERON:0005876!2.23e-07!1;UBERON:0004874!2.23e-07!1;UBERON:0002336!3.01e-07!1;UBERON:0001018!3.01e-07!1;UBERON:0002473!3.01e-07!1;UBERON:0005340!3.01e-07!1;UBERON:0002316!3.01e-07!1;UBERON:0003544!3.01e-07!1;UBERON:0001020!3.01e-07!1;UBERON:0005970!3.01e-07!1;UBERON:0002437!3.01e-07!1;UBERON:0002038!3.82e-07!1;UBERON:0009661!3.82e-07!1;UBERON:0004732!5.22e-07!13;UBERON:0002581!9.18e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;2.40e-66;4!UBERON:0000923;2.40e-66;4!UBERON:0010316;2.40e-66;4!UBERON:0005291;2.40e-66;4!UBERON:0002050;2.19e-53;5!UBERON:0005423;2.19e-53;5!UBERON:0000013;1.83e-14;5!UBERON:0002410;1.83e-14;5!UBERON:0000010;1.21e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.83e-14,5;UBERON:0002410,1.83e-14,5;UBERON:0000010,1.21e-08,8 | |||
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|short_description=p@chr1:236895237..236895246,+ | |||
}} | }} |
Latest revision as of 05:29, 28 July 2015
Short description: | p@chr1:236895237..236895246, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:236895237..236895246, + |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.83e-14 | 5 |
autonomic nervous system | 1.83e-14 | 5 |
peripheral nervous system | 1.21e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.10e-59 | 10 |
germ cell and embryonal cancer | 7.08e-28 | 22 |
germ cell cancer | 7.08e-28 | 22 |
neuroendocrine tumor | 2.74e-12 | 6 |