FFCP PHASE1:Hg19::chr1:40769918..40769923,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:40769918..40769923,- | |||
|coexpression_cluster_id=C150 | |||
|description=CAGE_peak_at_chr1:40769918..40769923,- | |description=CAGE_peak_at_chr1:40769918..40769923,- | ||
|id=chr1:40769918..40769923,- | |id=chr1:40769918..40769923,- | ||
|ontology_enrichment_celltype=CL:0000312!6.77e-105!5;CL:0000240!1.37e-87!6;CL:0000311!1.37e-87!6;CL:0000079!1.37e-87!6;CL:0000237!1.37e-87!6;CL:0000036!1.37e-87!6;CL:0000357!1.37e-87!6;CL:0000114!1.37e-87!6;CL:0000242!1.04e-66!2;CL:0000362!6.05e-66!8;CL:0002159!6.18e-41!13;CL:0000035!6.78e-27!20;CL:0002077!1.39e-16!33;CL:0000325!3.95e-14!39;CL:0000349!2.07e-12!3;CL:0002577!2.07e-12!3;CL:0000076!4.24e-09!62;CL:0000095!5.35e-08!17;CL:0000123!5.35e-08!17;CL:0000221!8.39e-08!71 | |ontology_enrichment_celltype=CL:0000312!6.77e-105!5;CL:0000240!1.37e-87!6;CL:0000311!1.37e-87!6;CL:0000079!1.37e-87!6;CL:0000237!1.37e-87!6;CL:0000036!1.37e-87!6;CL:0000357!1.37e-87!6;CL:0000114!1.37e-87!6;CL:0000242!1.04e-66!2;CL:0000362!6.05e-66!8;CL:0002159!6.18e-41!13;CL:0000035!6.78e-27!20;CL:0002077!1.39e-16!33;CL:0000325!3.95e-14!39;CL:0000349!2.07e-12!3;CL:0002577!2.07e-12!3;CL:0000076!4.24e-09!62;CL:0000095!5.35e-08!17;CL:0000123!5.35e-08!17;CL:0000221!8.39e-08!71 | ||
|ontology_enrichment_celltype_v019=CL:0000123;2.74e-50;2!CL:0000242;2.74e-50;2!CL:0002577;5.96e-34;3!CL:0000312;4.21e-21;5!CL:0000240;7.67e-18;6!CL:0000311;7.67e-18;6!CL:0000079;7.67e-18;6!CL:0000237;7.67e-18;6!CL:0000362;2.19e-12;9!CL:0002159;1.86e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.74e-50,2;CL:0002577,5.96e-34,3;CL:0000312,4.21e-21,5;CL:0000240,7.67e-18,6;CL:0000311,7.67e-18,6;CL:0000079,7.67e-18,6;CL:0000237,7.67e-18,6;CL:0000036,7.67e-18,6;CL:0000357,7.67e-18,6;CL:0000114,7.67e-18,6;CL:0000362,2.19e-12,9;CL:0002159,1.86e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000357;7.67e-18;6!CL:0000114;7.67e-18;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001003!4.50e-38!14;UBERON:0007376!4.50e-38!14;UBERON:0007383!4.50e-38!14;UBERON:0002097!8.60e-14!40;UBERON:0002199!2.51e-12!45;UBERON:0002416!2.51e-12!45;UBERON:0001987!1.22e-09!4;UBERON:0004340!1.22e-09!4 | |ontology_enrichment_uberon=UBERON:0001003!4.50e-38!14;UBERON:0007376!4.50e-38!14;UBERON:0007383!4.50e-38!14;UBERON:0002097!8.60e-14!40;UBERON:0002199!2.51e-12!45;UBERON:0002416!2.51e-12!45;UBERON:0001987!1.22e-09!4;UBERON:0004340!1.22e-09!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0001987;7.14e-26;4!UBERON:0001003;5.55e-08;15!UBERON:0007376;5.55e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,7.14e-26,4;UBERON:0004340,7.14e-26,4;UBERON:0003124,1.91e-15,7;UBERON:0005631,2.00e-08,14;UBERON:0000158,2.00e-08,14;UBERON:0001003,5.55e-08,15;UBERON:0007376,5.55e-08,15;UBERON:0007383,5.55e-08,15 | |||
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|short_description=p@chr1:40769918..40769923,- | |short_description=p@chr1:40769918..40769923,- | ||
}} | }} |
Latest revision as of 08:09, 28 July 2015
Short description: | p@chr1:40769918..40769923, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:40769918..40769923, - |
Coexpression cluster: | C150_merkel_carcinoid_nonsmall_gastrointestinal_argyrophil_pineal_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.74e-50 | 2 |
placental epithelial cell | 5.96e-34 | 3 |
keratinocyte | 4.21e-21 | 5 |
stratified squamous epithelial cell | 7.67e-18 | 6 |
keratin accumulating cell | 7.67e-18 | 6 |
stratified epithelial cell | 7.67e-18 | 6 |
keratinizing barrier epithelial cell | 7.67e-18 | 6 |
epithelial fate stem cell | 7.67e-18 | 6 |
stratified epithelial stem cell | 7.67e-18 | 6 |
surface ectodermal cell | 7.67e-18 | 6 |
epidermal cell | 2.19e-12 | 9 |
general ecto-epithelial cell | 1.86e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
placenta | 7.14e-26 | 4 |
allantois | 7.14e-26 | 4 |
chorion | 1.91e-15 | 7 |
extraembryonic membrane | 2.00e-08 | 14 |
membranous layer | 2.00e-08 | 14 |
skin epidermis | 5.55e-08 | 15 |
outer epithelium | 5.55e-08 | 15 |
enveloping layer of ectoderm | 5.55e-08 | 15 |