FFCP PHASE1:Hg19::chr1:70541774..70541784,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:70541774..70541784,+ | |||
|coexpression_cluster_id=C199 | |coexpression_cluster_id=C199 | ||
|description=CAGE_peak_at_chr1:70541774..70541784,+ | |description=CAGE_peak_at_chr1:70541774..70541784,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000708!8.08e-15!3 | |ontology_enrichment_celltype=CL:0000708!8.08e-15!3 | ||
|ontology_enrichment_celltype_v019=CL:0000243;1.22e-16;15!CL:0000125;1.22e-16;15!CL:0000095;5.09e-15;17!CL:0002319;6.40e-11;25 | |ontology_enrichment_celltype_v019=CL:0000243;1.22e-16;15!CL:0000125;1.22e-16;15!CL:0000095;5.09e-15;17!CL:0002319;6.40e-11;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000243,1.17e-16,15;CL:0000125,1.17e-16,15;CL:0000030,1.17e-16,15;CL:0000339,1.17e-16,15;CL:0000095,4.91e-15,17;CL:0000123,4.91e-15,17;CL:0002319,6.25e-11,25;CL:0000333,2.86e-07,41 | |||
|ontology_enrichment_development_v019=UBERON:0006238;5.16e-25;10!CL:0000339;1.22e-16;15 | |ontology_enrichment_development_v019=UBERON:0006238;5.16e-25;10!CL:0000339;1.22e-16;15 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3093;4.86e-23;11 | |ontology_enrichment_disease_v019=DOID:3093;4.86e-23;11 | ||
|ontology_enrichment_disease_v019_2=DOID:3093,4.59e-23,11 | |||
|ontology_enrichment_uberon=UBERON:0002021!1.31e-19!5;UBERON:0000955!2.57e-16!69;UBERON:0006238!2.57e-16!69;UBERON:0001017!3.12e-16!82;UBERON:0005743!2.05e-15!86;UBERON:0003210!8.08e-15!3;UBERON:0000073!8.02e-14!94;UBERON:0001016!8.02e-14!94;UBERON:0001049!1.92e-13!57;UBERON:0005068!1.92e-13!57;UBERON:0006241!1.92e-13!57;UBERON:0007135!1.92e-13!57;UBERON:0002308!6.84e-11!9;UBERON:0000125!6.84e-11!9;UBERON:0002020!2.40e-10!34;UBERON:0003528!2.40e-10!34;UBERON:0002616!3.08e-10!59;UBERON:0002780!1.33e-08!41;UBERON:0001890!1.33e-08!41;UBERON:0006240!1.33e-08!41;UBERON:0000033!1.40e-08!123;UBERON:0003075!1.42e-08!86;UBERON:0007284!1.42e-08!86;UBERON:0003080!2.15e-08!42;UBERON:0002346!3.81e-08!90;UBERON:0000153!4.11e-08!129;UBERON:0007811!4.11e-08!129;UBERON:0001869!7.85e-08!32;UBERON:0002791!1.35e-07!33;UBERON:0001893!2.24e-07!34;UBERON:0004121!5.22e-07!169;UBERON:0003076!8.13e-07!15;UBERON:0003057!8.13e-07!15;UBERON:0000924!8.30e-07!173;UBERON:0006601!8.30e-07!173;UBERON:0009663!8.34e-07!7 | |ontology_enrichment_uberon=UBERON:0002021!1.31e-19!5;UBERON:0000955!2.57e-16!69;UBERON:0006238!2.57e-16!69;UBERON:0001017!3.12e-16!82;UBERON:0005743!2.05e-15!86;UBERON:0003210!8.08e-15!3;UBERON:0000073!8.02e-14!94;UBERON:0001016!8.02e-14!94;UBERON:0001049!1.92e-13!57;UBERON:0005068!1.92e-13!57;UBERON:0006241!1.92e-13!57;UBERON:0007135!1.92e-13!57;UBERON:0002308!6.84e-11!9;UBERON:0000125!6.84e-11!9;UBERON:0002020!2.40e-10!34;UBERON:0003528!2.40e-10!34;UBERON:0002616!3.08e-10!59;UBERON:0002780!1.33e-08!41;UBERON:0001890!1.33e-08!41;UBERON:0006240!1.33e-08!41;UBERON:0000033!1.40e-08!123;UBERON:0003075!1.42e-08!86;UBERON:0007284!1.42e-08!86;UBERON:0003080!2.15e-08!42;UBERON:0002346!3.81e-08!90;UBERON:0000153!4.11e-08!129;UBERON:0007811!4.11e-08!129;UBERON:0001869!7.85e-08!32;UBERON:0002791!1.35e-07!33;UBERON:0001893!2.24e-07!34;UBERON:0004121!5.22e-07!169;UBERON:0003076!8.13e-07!15;UBERON:0003057!8.13e-07!15;UBERON:0000924!8.30e-07!173;UBERON:0006601!8.30e-07!173;UBERON:0009663!8.34e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002118;1.71e-14;5 | |ontology_enrichment_uberon_v019=UBERON:0002118;1.71e-14;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,1.83e-14,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.699810938274399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8539883275459,1.35983700206033,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,1.09109195521536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.699810938274399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8539883275459,1.35983700206033,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,1.09109195521536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:70541774..70541784,+ | |short_description=p@chr1:70541774..70541784,+ | ||
}} | }} |
Latest revision as of 10:11, 28 July 2015
Short description: | p@chr1:70541774..70541784, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:70541774..70541784, + |
Coexpression cluster: | C199_glioblastoma_B_osteosarcoma_Fibroblast_heart_rhabdomyosarcoma_myxofibrosarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 1.17e-16 | 15 |
glial cell | 1.17e-16 | 15 |
glioblast | 1.17e-16 | 15 |
glioblast (sensu Vertebrata) | 1.17e-16 | 15 |
neuron associated cell | 4.91e-15 | 17 |
neuron associated cell (sensu Vertebrata) | 4.91e-15 | 17 |
neural cell | 6.25e-11 | 25 |
migratory neural crest cell | 2.86e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
right ovary | 1.83e-14 | 5 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 4.59e-23 | 11 |