FFCP PHASE1:Hg19::chr1:81674218..81674235,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:81674218..81674235,+ to FFCP PHASE1:Hg19::chr1:81674218..81674235,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-17bp_to_ENST00000426688_5end | |||
|cluster_id=chr1:81674218..81674235,+ | |||
|description=CAGE_peak_1_at_ENST00000426688_5end | |||
|id=chr1:81674218..81674235,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;3.02e-11;2!CL:0002564;6.34e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,7.30e-11,8;CL:0002564,5.54e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002242;6.34e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002242,5.54e-08,3;UBERON:0003068,5.54e-08,3;UBERON:0002328,5.54e-08,3;UBERON:0004880,5.54e-08,3 | |||
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| ||
|short_description=p1@ENST00000426688 | |||
}} | }} |
Latest revision as of 10:35, 28 July 2015
Short description: | p1@ENST00000426688 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000426688_5end |
Coexpression cluster: | NA |
Association with transcript: | -17bp_to_ENST00000426688_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 7.30e-11 | 8 |
nucleus pulposus cell of intervertebral disc | 5.54e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
nucleus pulposus | 5.54e-08 | 3 |
axial mesoderm | 5.54e-08 | 3 |
notochord | 5.54e-08 | 3 |
chordamesoderm | 5.54e-08 | 3 |