FFCP PHASE1:Hg19::chr1:94713418..94713436,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-27bp_to_ENST00000413103_5end | |association_with_transcript=-27bp_to_ENST00000413103_5end | ||
|cluster_id=chr1:94713418..94713436,+ | |||
|description=CAGE_peak_1_at_ENST00000413103_5end | |description=CAGE_peak_1_at_ENST00000413103_5end | ||
|id=chr1:94713418..94713436,+ | |id=chr1:94713418..94713436,+ | ||
Latest revision as of 11:31, 28 July 2015
| Short description: | p1@ENST00000413103 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_ENST00000413103_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -27bp_to_ENST00000413103_5end |
| EntrezGene: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p1@ENST00000413103 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell of nephron | 9.39e-41 | 15 |
| kidney cortical cell | 1.00e-40 | 12 |
| renal cortical epithelial cell | 1.00e-40 | 12 |
| glomerular cell | 9.62e-40 | 7 |
| kidney corpuscule cell | 9.62e-40 | 7 |
| kidney cell | 8.20e-36 | 17 |
| kidney epithelial cell | 8.20e-36 | 17 |
| meso-epithelial cell | 4.33e-31 | 45 |
| endothelial cell | 1.12e-28 | 36 |
| glomerular endothelial cell | 2.12e-25 | 5 |
Showing 1 to 10 of 30 entries
| Ontology term | p-value | n |
|---|---|---|
| parenchyma | 8.96e-41 | 15 |
| nephron epithelium | 9.39e-41 | 15 |
| renal tubule | 9.39e-41 | 15 |
| nephron tubule | 9.39e-41 | 15 |
| nephron | 9.39e-41 | 15 |
| uriniferous tubule | 9.39e-41 | 15 |
| nephrogenic mesenchyme | 9.39e-41 | 15 |
| cortex of kidney | 1.00e-40 | 12 |
| renal parenchyma | 1.00e-40 | 12 |
| primitive nephron | 9.62e-40 | 7 |
Showing 1 to 10 of 70 entries
