FFCP PHASE1:Hg19::chr20:4230672..4230694,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:4230672..4230694,- | |||
|coexpression_cluster_id=C63 | |||
|description=CAGE_peak_at_chr20:4230672..4230694,- | |description=CAGE_peak_at_chr20:4230672..4230694,- | ||
|id=chr20:4230672..4230694,- | |id=chr20:4230672..4230694,- | ||
|ontology_enrichment_celltype=CL:0002601!3.58e-09!1 | |ontology_enrichment_celltype=CL:0002601!3.58e-09!1 | ||
|ontology_enrichment_celltype_v019=CL:0000333;7.25e-08;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!2.30e-28!10;DOID:3095!1.22e-12!22;DOID:2994!1.22e-12!22 | |ontology_enrichment_disease=DOID:171!2.30e-28!10;DOID:3095!1.22e-12!22;DOID:2994!1.22e-12!22 | ||
|ontology_enrichment_disease_v019=DOID:171;5.27e-53;10!DOID:3095;1.51e-24;22!DOID:2994;1.51e-24;22!DOID:169;9.23e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,5.27e-53,10;DOID:3095,1.51e-24,22;DOID:2994,1.51e-24,22;DOID:169,8.97e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002106!2.26e-11!3;UBERON:0004854!2.26e-11!3;UBERON:0009034!2.26e-11!3;UBERON:0002095!2.26e-11!3;UBERON:0004782!2.26e-11!3;UBERON:0003281!2.26e-11!3;UBERON:0009664!2.26e-11!3;UBERON:0002296!2.26e-11!3;UBERON:0005602!2.26e-11!3;UBERON:0001179!2.26e-11!3;UBERON:0006293!2.26e-11!3;UBERON:0000998!3.31e-09!1;UBERON:0006868!3.31e-09!1;UBERON:0006834!8.49e-09!1;UBERON:0000013!2.70e-07!5;UBERON:0002410!2.70e-07!5 | |ontology_enrichment_uberon=UBERON:0002106!2.26e-11!3;UBERON:0004854!2.26e-11!3;UBERON:0009034!2.26e-11!3;UBERON:0002095!2.26e-11!3;UBERON:0004782!2.26e-11!3;UBERON:0003281!2.26e-11!3;UBERON:0009664!2.26e-11!3;UBERON:0002296!2.26e-11!3;UBERON:0005602!2.26e-11!3;UBERON:0001179!2.26e-11!3;UBERON:0006293!2.26e-11!3;UBERON:0000998!3.31e-09!1;UBERON:0006868!3.31e-09!1;UBERON:0006834!8.49e-09!1;UBERON:0000013!2.70e-07!5;UBERON:0002410!2.70e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.38e-74;4!UBERON:0000923;1.38e-74;4!UBERON:0010316;1.38e-74;4!UBERON:0005291;1.38e-74;4!UBERON:0002050;6.66e-60;5!UBERON:0005423;6.66e-60;5!UBERON:0002106;3.06e-12;3!UBERON:0000922;6.83e-09;49!UBERON:0000013;7.25e-08;5!UBERON:0002410;7.25e-08;5!UBERON:0004177;7.25e-08;5!UBERON:0005057;7.25e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.24e-12,3;UBERON:0004854,3.24e-12,3;UBERON:0009034,3.24e-12,3;UBERON:0002095,3.24e-12,3;UBERON:0004782,3.24e-12,3;UBERON:0003281,3.24e-12,3;UBERON:0009664,3.24e-12,3;UBERON:0002296,3.24e-12,3;UBERON:0005602,3.24e-12,3;UBERON:0001179,3.24e-12,3;UBERON:0006293,3.24e-12,3;UBERON:0000013,7.01e-08,5;UBERON:0002410,7.01e-08,5 | |||
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|short_description=p@chr20:4230672..4230694,- | |short_description=p@chr20:4230672..4230694,- | ||
}} | }} |
Latest revision as of 14:08, 28 July 2015
Short description: | p@chr20:4230672..4230694, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:4230672..4230694, - |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spleen | 3.24e-12 | 3 |
gastrointestinal system mesentery | 3.24e-12 | 3 |
stomach region | 3.24e-12 | 3 |
mesentery | 3.24e-12 | 3 |
gastrointestinal system serosa | 3.24e-12 | 3 |
mesentery of stomach | 3.24e-12 | 3 |
gut mesentery | 3.24e-12 | 3 |
dorsal mesentery | 3.24e-12 | 3 |
dorsal mesogastrium | 3.24e-12 | 3 |
peritoneal cavity | 3.24e-12 | 3 |
spleen primordium | 3.24e-12 | 3 |
sympathetic nervous system | 7.01e-08 | 5 |
autonomic nervous system | 7.01e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 5.27e-53 | 10 |
germ cell and embryonal cancer | 1.51e-24 | 22 |
germ cell cancer | 1.51e-24 | 22 |
neuroendocrine tumor | 8.97e-07 | 6 |