FFCP PHASE1:Hg19::chr20:48389254..48389268,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:48389254..48389268,+
|short_description=p@chr20:48389254..48389268,+
|description=CAGE_peak_at_chr20:48389254..48389268,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:48389254..48389268,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr20:48389254..48389268,+ | |||
|id=chr20:48389254..48389268,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.43e-07!12;CL:0000417!2.43e-07!12;CL:0000668!2.43e-07!12;CL:0000414!2.43e-07!12;CL:0000412!2.43e-07!12;CL:0000182!2.43e-07!12;CL:0002057!6.81e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.51e-15;33!CL:0002057;5.51e-15;33!CL:0000473;1.21e-10;39!CL:0000234;1.21e-10;39!CL:0000576;8.48e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.63e-12,42;CL:0002057,5.63e-12,42;CL:0000473,1.71e-10,48;CL:0000234,1.71e-10,48;CL:0002194,2.06e-08,59;CL:0000576,2.06e-08,59;CL:0000040,2.06e-08,59;CL:0000559,2.06e-08,59;CL:0002009,3.84e-08,61;CL:0000839,1.54e-07,66;CL:0000557,1.99e-07,67;CL:0000766,6.39e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;2.72e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;2.73e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,3.02e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0001041!5.13e-07!98;UBERON:0002405!6.64e-07!115;UBERON:0005177!9.79e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;2.23e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,2.23e-11,2 | |||
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| ||
|short_description=p@chr20:48389254..48389268,+ | |||
}} | }} |
Latest revision as of 15:05, 28 July 2015
Short description: | p@chr20:48389254..48389268, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:48389254..48389268, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.63e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.63e-12 | 42 |
defensive cell | 1.71e-10 | 48 |
phagocyte | 1.71e-10 | 48 |
monopoietic cell | 2.06e-08 | 59 |
monocyte | 2.06e-08 | 59 |
monoblast | 2.06e-08 | 59 |
promonocyte | 2.06e-08 | 59 |
macrophage dendritic cell progenitor | 3.84e-08 | 61 |
myeloid lineage restricted progenitor cell | 1.54e-07 | 66 |
granulocyte monocyte progenitor cell | 1.99e-07 | 67 |
myeloid leukocyte | 6.39e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 2.23e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 3.02e-11 | 2 |