FFCP PHASE1:Hg19::chr20:48389254..48389268,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:48389254..48389268,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr20:48389254..48389268,+ | |description=CAGE_peak_at_chr20:48389254..48389268,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000181!2.43e-07!12;CL:0000417!2.43e-07!12;CL:0000668!2.43e-07!12;CL:0000414!2.43e-07!12;CL:0000412!2.43e-07!12;CL:0000182!2.43e-07!12;CL:0002057!6.81e-07!42 | |ontology_enrichment_celltype=CL:0000181!2.43e-07!12;CL:0000417!2.43e-07!12;CL:0000668!2.43e-07!12;CL:0000414!2.43e-07!12;CL:0000412!2.43e-07!12;CL:0000182!2.43e-07!12;CL:0002057!6.81e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.51e-15;33!CL:0002057;5.51e-15;33!CL:0000473;1.21e-10;39!CL:0000234;1.21e-10;39!CL:0000576;8.48e-07;48 | |ontology_enrichment_celltype_v019=CL:0000860;5.51e-15;33!CL:0002057;5.51e-15;33!CL:0000473;1.21e-10;39!CL:0000234;1.21e-10;39!CL:0000576;8.48e-07;48 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.63e-12,42;CL:0002057,5.63e-12,42;CL:0000473,1.71e-10,48;CL:0000234,1.71e-10,48;CL:0002194,2.06e-08,59;CL:0000576,2.06e-08,59;CL:0000040,2.06e-08,59;CL:0000559,2.06e-08,59;CL:0002009,3.84e-08,61;CL:0000839,1.54e-07,66;CL:0000557,1.99e-07,67;CL:0000766,6.39e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;2.72e-08;42 | |ontology_enrichment_development_v019=CL:0002057;2.72e-08;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4468;2.73e-11;2 | |ontology_enrichment_disease_v019=DOID:4468;2.73e-11;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4468,3.02e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0001041!5.13e-07!98;UBERON:0002405!6.64e-07!115;UBERON:0005177!9.79e-07!107 | |ontology_enrichment_uberon=UBERON:0001041!5.13e-07!98;UBERON:0002405!6.64e-07!115;UBERON:0005177!9.79e-07!107 | ||
|ontology_enrichment_uberon_v019=UBERON:0003127;2.23e-11;2 | |ontology_enrichment_uberon_v019=UBERON:0003127;2.23e-11;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,2.23e-11,2 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601633342410425,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,6.55016793399575,0.645484683583826,2.70852973188684,0,0,0,4.89734227793444,1.28371610830437,0.639337125799041,0,0,0,0.580418477257168,0,0,0,0,0.65156653411535,1.21079900526674,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,1.77236972004421,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28525931422807,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,1.19472429772959,0,0,0,0.0979923974143777,0.174118413160805,0,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0,0,0.320635281006135,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0.13480708770837,0.590564889088493,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,2.78449243988357,0,0,0.13223260174269,0.513260513652988,0,0.320362237703084,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0.606965604236632,0.227662191351298,0,0,0.342976018874837,0,0.0657727735628491,0.827356886187777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0.31020638566432,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0.33883824611688,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0,0,0,0,0,0,0.134704106029175,3.87299909120452,0,0.162806537221949,0,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p@chr20:48389254..48389268,+ | |short_description=p@chr20:48389254..48389268,+ | ||
}} | }} |
Latest revision as of 15:05, 28 July 2015
Short description: | p@chr20:48389254..48389268, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:48389254..48389268, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.63e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.63e-12 | 42 |
defensive cell | 1.71e-10 | 48 |
phagocyte | 1.71e-10 | 48 |
monopoietic cell | 2.06e-08 | 59 |
monocyte | 2.06e-08 | 59 |
monoblast | 2.06e-08 | 59 |
promonocyte | 2.06e-08 | 59 |
macrophage dendritic cell progenitor | 3.84e-08 | 61 |
myeloid lineage restricted progenitor cell | 1.54e-07 | 66 |
granulocyte monocyte progenitor cell | 1.99e-07 | 67 |
myeloid leukocyte | 6.39e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 2.23e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 3.02e-11 | 2 |