FFCP PHASE1:Hg19::chr20:49727833..49727839,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:49727833..49727839,- | |||
|coexpression_cluster_id=C150 | |||
|description=CAGE_peak_at_chr20:49727833..49727839,- | |description=CAGE_peak_at_chr20:49727833..49727839,- | ||
|id=chr20:49727833..49727839,- | |id=chr20:49727833..49727839,- | ||
|ontology_enrichment_celltype=CL:0000242!5.68e-99!2;CL:0000312!1.81e-40!5;CL:0000240!5.98e-34!6;CL:0000311!5.98e-34!6;CL:0000079!5.98e-34!6;CL:0000237!5.98e-34!6;CL:0000036!5.98e-34!6;CL:0000357!5.98e-34!6;CL:0000114!5.98e-34!6;CL:0000362!8.65e-26!8;CL:0002159!2.43e-16!13;CL:0000095!1.55e-11!17;CL:0000123!1.55e-11!17;CL:0000035!5.16e-11!20;CL:0002319!1.98e-08!25;CL:0002077!4.46e-07!33 | |ontology_enrichment_celltype=CL:0000242!5.68e-99!2;CL:0000312!1.81e-40!5;CL:0000240!5.98e-34!6;CL:0000311!5.98e-34!6;CL:0000079!5.98e-34!6;CL:0000237!5.98e-34!6;CL:0000036!5.98e-34!6;CL:0000357!5.98e-34!6;CL:0000114!5.98e-34!6;CL:0000362!8.65e-26!8;CL:0002159!2.43e-16!13;CL:0000095!1.55e-11!17;CL:0000123!1.55e-11!17;CL:0000035!5.16e-11!20;CL:0002319!1.98e-08!25;CL:0002077!4.46e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0000123;3.29e-195;2!CL:0000242;3.29e-195;2!CL:0000312;3.49e-79;5!CL:0000240;2.83e-66;6!CL:0000311;2.83e-66;6!CL:0000079;2.83e-66;6!CL:0000237;2.83e-66;6!CL:0000362;9.75e-45;9!CL:0002159;2.55e-29;14!CL:0000095;5.37e-22;17!CL:0002319;6.71e-16;25!CL:0002077;1.77e-12;34!CL:0000076;1.48e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,3.29e-195,2;CL:0000312,3.49e-79,5;CL:0000240,2.83e-66,6;CL:0000311,2.83e-66,6;CL:0000079,2.83e-66,6;CL:0000237,2.83e-66,6;CL:0000036,2.83e-66,6;CL:0000357,2.83e-66,6;CL:0000114,2.83e-66,6;CL:0000362,9.75e-45,9;CL:0002159,2.55e-29,14;CL:0000095,5.37e-22,17;CL:0000123,5.37e-22,17;CL:0002319,6.71e-16,25;CL:0002077,6.62e-13,34;CL:0000333,1.77e-10,41;CL:0000133,9.44e-08,59;CL:0000076,1.52e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000357;2.83e-66;6!CL:0000114;2.83e-66;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002038!6.58e-50!1;UBERON:0009661!6.58e-50!1;UBERON:0002950!9.18e-26!2;UBERON:0001891!9.18e-26!2;UBERON:0009616!9.18e-26!2;UBERON:0006331!1.12e-17!3;UBERON:0001003!2.95e-15!14;UBERON:0007376!2.95e-15!14;UBERON:0007383!2.95e-15!14;UBERON:0009663!2.35e-08!7;UBERON:0002298!1.80e-07!8;UBERON:0002308!8.85e-07!9;UBERON:0002420!8.85e-07!9;UBERON:0000125!8.85e-07!9;UBERON:0007245!8.85e-07!9;UBERON:0010009!8.85e-07!9;UBERON:0010011!8.85e-07!9;UBERON:0000454!8.85e-07!9 | |ontology_enrichment_uberon=UBERON:0002038!6.58e-50!1;UBERON:0009661!6.58e-50!1;UBERON:0002950!9.18e-26!2;UBERON:0001891!9.18e-26!2;UBERON:0009616!9.18e-26!2;UBERON:0006331!1.12e-17!3;UBERON:0001003!2.95e-15!14;UBERON:0007376!2.95e-15!14;UBERON:0007383!2.95e-15!14;UBERON:0009663!2.35e-08!7;UBERON:0002298!1.80e-07!8;UBERON:0002308!8.85e-07!9;UBERON:0002420!8.85e-07!9;UBERON:0000125!8.85e-07!9;UBERON:0007245!8.85e-07!9;UBERON:0010009!8.85e-07!9;UBERON:0010011!8.85e-07!9;UBERON:0000454!8.85e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001003;1.82e-27;15!UBERON:0007376;1.82e-27;15!UBERON:0010371;1.83e-13;31!UBERON:0003102;8.57e-09;50!UBERON:0002097;3.54e-08;41!UBERON:0002199;1.47e-07;46!UBERON:0002416;1.47e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,1.82e-27,15;UBERON:0007376,1.82e-27,15;UBERON:0007383,1.82e-27,15;UBERON:0002097,6.32e-11,41;UBERON:0002199,7.07e-10,46;UBERON:0002416,7.07e-10,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9867169858202,3.76794674388145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9867169858202,3.76794674388145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr20:49727833..49727839,- | |short_description=p@chr20:49727833..49727839,- | ||
}} | }} |
Latest revision as of 15:18, 28 July 2015
Short description: | p@chr20:49727833..49727839, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:49727833..49727839, - |
Coexpression cluster: | C150_merkel_carcinoid_nonsmall_gastrointestinal_argyrophil_pineal_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 3.29e-195 | 2 |
keratinocyte | 3.49e-79 | 5 |
stratified squamous epithelial cell | 2.83e-66 | 6 |
keratin accumulating cell | 2.83e-66 | 6 |
stratified epithelial cell | 2.83e-66 | 6 |
keratinizing barrier epithelial cell | 2.83e-66 | 6 |
epithelial fate stem cell | 2.83e-66 | 6 |
stratified epithelial stem cell | 2.83e-66 | 6 |
surface ectodermal cell | 2.83e-66 | 6 |
epidermal cell | 9.75e-45 | 9 |
general ecto-epithelial cell | 2.55e-29 | 14 |
neuron associated cell | 5.37e-22 | 17 |
neuron associated cell (sensu Vertebrata) | 5.37e-22 | 17 |
neural cell | 6.71e-16 | 25 |
ecto-epithelial cell | 6.62e-13 | 34 |
migratory neural crest cell | 1.77e-10 | 41 |
neurectodermal cell | 9.44e-08 | 59 |
squamous epithelial cell | 1.52e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 1.82e-27 | 15 |
outer epithelium | 1.82e-27 | 15 |
enveloping layer of ectoderm | 1.82e-27 | 15 |
skin of body | 6.32e-11 | 41 |
integument | 7.07e-10 | 46 |
integumental system | 7.07e-10 | 46 |