FFCP PHASE1:Hg19::chr20:57698461..57698483,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:57698461..57698483,+ | |||
|coexpression_cluster_id=C682 | |||
|description=CAGE_peak_at_chr20:57698461..57698483,+ | |description=CAGE_peak_at_chr20:57698461..57698483,+ | ||
|id=chr20:57698461..57698483,+ | |id=chr20:57698461..57698483,+ | ||
|ontology_enrichment_celltype=CL:0000838!2.38e-40!52;CL:0000542!1.93e-39!53;CL:0000051!1.93e-39!53;CL:0000236!1.72e-32!14;CL:0000945!2.13e-24!24;CL:0000826!2.13e-24!24;CL:0002087!1.44e-22!119;CL:0000791!3.70e-21!18;CL:0000789!3.70e-21!18;CL:0002420!3.70e-21!18;CL:0002419!3.70e-21!18;CL:0000790!3.70e-21!18;CL:0000738!3.83e-19!140;CL:0002031!4.21e-17!124;CL:0000084!1.78e-14!25;CL:0000827!1.78e-14!25;CL:0000037!6.44e-14!172;CL:0000566!6.44e-14!172;CL:0000988!1.14e-12!182;CL:0000624!1.61e-12!6;CL:0000625!3.43e-12!11;CL:0002032!8.11e-12!165;CL:0000837!8.11e-12!165;CL:0000842!1.29e-09!3;CL:0000224!2.60e-07!4;CL:0000815!5.93e-07!2;CL:0000792!5.93e-07!2;CL:0002677!5.93e-07!2 | |ontology_enrichment_celltype=CL:0000838!2.38e-40!52;CL:0000542!1.93e-39!53;CL:0000051!1.93e-39!53;CL:0000236!1.72e-32!14;CL:0000945!2.13e-24!24;CL:0000826!2.13e-24!24;CL:0002087!1.44e-22!119;CL:0000791!3.70e-21!18;CL:0000789!3.70e-21!18;CL:0002420!3.70e-21!18;CL:0002419!3.70e-21!18;CL:0000790!3.70e-21!18;CL:0000738!3.83e-19!140;CL:0002031!4.21e-17!124;CL:0000084!1.78e-14!25;CL:0000827!1.78e-14!25;CL:0000037!6.44e-14!172;CL:0000566!6.44e-14!172;CL:0000988!1.14e-12!182;CL:0000624!1.61e-12!6;CL:0000625!3.43e-12!11;CL:0002032!8.11e-12!165;CL:0000837!8.11e-12!165;CL:0000842!1.29e-09!3;CL:0000224!2.60e-07!4;CL:0000815!5.93e-07!2;CL:0000792!5.93e-07!2;CL:0002677!5.93e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000236;4.39e-71;13!CL:0000945;7.96e-53;24!CL:0000542;2.41e-21;53!CL:0000817;2.21e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,4.27e-66,14;CL:0000945,6.62e-53,24;CL:0000826,6.62e-53,24;CL:0000838,6.36e-27,52;CL:0000542,2.29e-26,53;CL:0000051,2.29e-26,53;CL:0002087,1.19e-10,115;CL:0002031,4.18e-10,120;CL:0000738,1.26e-08,136;CL:0002032,6.68e-07,161;CL:0000837,6.68e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000051;2.41e-21;53!UBERON:0001045;6.98e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!5.99e-09!15;UBERON:0000179!5.99e-09!15;UBERON:0000463!5.99e-09!15;UBERON:0000007!2.42e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;3.17e-09;1!UBERON:0001961;3.17e-09;1!UBERON:0001744;3.17e-09;1!UBERON:0001042;3.17e-09;1!UBERON:0001735;3.17e-09;1!UBERON:0000029;6.98e-09;1!UBERON:0001154;6.98e-09;1!UBERON:0001153;6.98e-09;1!UBERON:0009854;6.98e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,3.58e-09,1;UBERON:0001961,3.58e-09,1;UBERON:0001744,3.58e-09,1;UBERON:0001735,3.58e-09,1;UBERON:0001154,4.54e-09,1;UBERON:0001153,4.54e-09,1;UBERON:0001045,4.54e-09,1;UBERON:0000029,6.72e-09,1 | |||
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| ||
|short_description=p@chr20:57698461..57698483,+ | |short_description=p@chr20:57698461..57698483,+ | ||
}} | }} |
Latest revision as of 15:54, 28 July 2015
Short description: | p@chr20:57698461..57698483, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:57698461..57698483, + |
Coexpression cluster: | C682_Burkitt_lymphoma_CD19_appendix_tonsil_spleen_diffuse |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 4.27e-66 | 14 |
lymphocyte of B lineage | 6.62e-53 | 24 |
pro-B cell | 6.62e-53 | 24 |
lymphoid lineage restricted progenitor cell | 6.36e-27 | 52 |
lymphocyte | 2.29e-26 | 53 |
common lymphoid progenitor | 2.29e-26 | 53 |
nongranular leukocyte | 1.19e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 4.18e-10 | 120 |
leukocyte | 1.26e-08 | 136 |
hematopoietic oligopotent progenitor cell | 6.68e-07 | 161 |
hematopoietic multipotent progenitor cell | 6.68e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
tonsil | 3.58e-09 | 1 |
mucosa-associated lymphoid tissue | 3.58e-09 | 1 |
lymphoid tissue | 3.58e-09 | 1 |
tonsillar ring | 3.58e-09 | 1 |
vermiform appendix | 4.54e-09 | 1 |
caecum | 4.54e-09 | 1 |
midgut | 4.54e-09 | 1 |
lymph node | 6.72e-09 | 1 |