FFCP PHASE1:Hg19::chr20:58402101..58402106,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:58402101..58402106,+ | |||
|coexpression_cluster_id=C131 | |||
|description=CAGE_peak_at_chr20:58402101..58402106,+ | |description=CAGE_peak_at_chr20:58402101..58402106,+ | ||
|id=chr20:58402101..58402106,+ | |id=chr20:58402101..58402106,+ | ||
|ontology_enrichment_celltype=CL:0002623!3.34e-09!3;CL:0002231!5.62e-09!3;CL:0002553!2.23e-07!1;CL:0002336!2.67e-07!1;CL:0002261!2.67e-07!1;CL:0002170!2.67e-07!1 | |ontology_enrichment_celltype=CL:0002623!3.34e-09!3;CL:0002231!5.62e-09!3;CL:0002553!2.23e-07!1;CL:0002336!2.67e-07!1;CL:0002261!2.67e-07!1;CL:0002170!2.67e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002537;2.80e-15;5!CL:0002623;2.12e-07;3!CL:0002231;2.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,2.51e-15,5;CL:0002623,2.19e-07,3;CL:0002231,2.79e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3111!4.34e-07!1;DOID:3603!4.34e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002294!2.50e-13!7;UBERON:0001173!2.50e-13!7;UBERON:0004912!2.50e-13!7;UBERON:0001007!2.32e-12!155;UBERON:0001555!2.32e-12!155;UBERON:0007026!2.32e-12!155;UBERON:0004119!2.65e-12!169;UBERON:0000925!2.65e-12!169;UBERON:0006595!2.65e-12!169;UBERON:0005153!1.47e-11!37;UBERON:0005911!3.07e-11!82;UBERON:0004921!4.87e-11!129;UBERON:0004185!4.87e-11!129;UBERON:0000077!6.53e-11!130;UBERON:0005178!5.48e-10!34;UBERON:0002224!5.48e-10!34;UBERON:0005181!1.14e-09!35;UBERON:0002048!3.11e-09!22;UBERON:0000117!3.11e-09!22;UBERON:0000171!3.11e-09!22;UBERON:0000170!3.11e-09!22;UBERON:0005597!3.11e-09!22;UBERON:0000118!3.11e-09!22;UBERON:0008947!8.19e-09!38;UBERON:0003258!8.19e-09!38;UBERON:0000466!1.25e-08!126;UBERON:0002110!1.29e-08!3;UBERON:0006242!1.29e-08!3;UBERON:0000305!2.33e-08!7;UBERON:0000464!2.67e-08!104;UBERON:0005157!5.52e-08!51;UBERON:0001004!5.78e-08!72;UBERON:0001041!1.26e-07!98;UBERON:0000065!1.39e-07!53;UBERON:0004871!2.29e-07!8;UBERON:0004913!3.21e-07!1;UBERON:0003703!3.21e-07!1;UBERON:0001174!3.21e-07!1;UBERON:0004914!3.21e-07!1;UBERON:0002171!3.41e-07!1;UBERON:0006518!3.41e-07!1;UBERON:0008949!3.41e-07!1;UBERON:0000101!3.41e-07!1;UBERON:0002167!3.41e-07!1;UBERON:0005631!4.52e-07!14;UBERON:0000158!4.52e-07!14 | |ontology_enrichment_uberon=UBERON:0002294!2.50e-13!7;UBERON:0001173!2.50e-13!7;UBERON:0004912!2.50e-13!7;UBERON:0001007!2.32e-12!155;UBERON:0001555!2.32e-12!155;UBERON:0007026!2.32e-12!155;UBERON:0004119!2.65e-12!169;UBERON:0000925!2.65e-12!169;UBERON:0006595!2.65e-12!169;UBERON:0005153!1.47e-11!37;UBERON:0005911!3.07e-11!82;UBERON:0004921!4.87e-11!129;UBERON:0004185!4.87e-11!129;UBERON:0000077!6.53e-11!130;UBERON:0005178!5.48e-10!34;UBERON:0002224!5.48e-10!34;UBERON:0005181!1.14e-09!35;UBERON:0002048!3.11e-09!22;UBERON:0000117!3.11e-09!22;UBERON:0000171!3.11e-09!22;UBERON:0000170!3.11e-09!22;UBERON:0005597!3.11e-09!22;UBERON:0000118!3.11e-09!22;UBERON:0008947!8.19e-09!38;UBERON:0003258!8.19e-09!38;UBERON:0000466!1.25e-08!126;UBERON:0002110!1.29e-08!3;UBERON:0006242!1.29e-08!3;UBERON:0000305!2.33e-08!7;UBERON:0000464!2.67e-08!104;UBERON:0005157!5.52e-08!51;UBERON:0001004!5.78e-08!72;UBERON:0001041!1.26e-07!98;UBERON:0000065!1.39e-07!53;UBERON:0004871!2.29e-07!8;UBERON:0004913!3.21e-07!1;UBERON:0003703!3.21e-07!1;UBERON:0001174!3.21e-07!1;UBERON:0004914!3.21e-07!1;UBERON:0002171!3.41e-07!1;UBERON:0006518!3.41e-07!1;UBERON:0008949!3.41e-07!1;UBERON:0000101!3.41e-07!1;UBERON:0002167!3.41e-07!1;UBERON:0005631!4.52e-07!14;UBERON:0000158!4.52e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0000305;3.39e-11;7!UBERON:0000007;2.37e-10;2!UBERON:0003127;3.27e-10;2!UBERON:0005631;4.11e-08;10!UBERON:0000158;4.11e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,3.14e-11,7;UBERON:0000007,2.49e-10,2;UBERON:0003127,3.58e-10,2;UBERON:0004871,6.06e-10,8;UBERON:0004921,4.25e-07,118 | |||
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|short_description=p@chr20:58402101..58402106,+ | |short_description=p@chr20:58402101..58402106,+ | ||
}} | }} |
Latest revision as of 15:57, 28 July 2015
Short description: | p@chr20:58402101..58402106, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:58402101..58402106, + |
Coexpression cluster: | C131_lung_trachea_Alveolar_thyroid_umbilical_throat_skin |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 2.51e-15 | 5 |
acinar cell of salivary gland | 2.19e-07 | 3 |
epithelial cell of prostate | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
amnion | 3.14e-11 | 7 |
pituitary gland | 2.49e-10 | 2 |
open tracheal system trachea | 3.58e-10 | 2 |
somatic layer of lateral plate mesoderm | 6.06e-10 | 8 |
subdivision of digestive tract | 4.25e-07 | 118 |