FFCP PHASE1:Hg19::chr20:7755823..7755848,-: Difference between revisions
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|id=chr20:7755823..7755848,-
|short_description=p@chr20:7755823..7755848,-
|description=CAGE_peak_at_chr20:7755823..7755848,-
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:7755823..7755848,- | |||
|coexpression_cluster_id=C91 | |||
|description=CAGE_peak_at_chr20:7755823..7755848,- | |||
|id=chr20:7755823..7755848,- | |||
|ontology_enrichment_celltype=CL:0000359!8.51e-16!32;CL:0002594!3.42e-15!4;CL:0002595!1.59e-12!5;CL:0000192!5.60e-12!42;CL:0000514!5.60e-12!42;CL:0000187!2.97e-09!54;CL:0000680!9.47e-09!57;CL:0000056!9.47e-09!57;CL:0000355!9.47e-09!57;CL:0002593!1.29e-08!2;CL:0000183!1.92e-08!59;CL:0002589!2.48e-08!2;CL:0000393!2.69e-08!60;CL:0000211!2.69e-08!60 | |||
|ontology_enrichment_celltype_v019=CL:0002593;4.52e-50;2!CL:1000306;5.56e-26;4!CL:0002547;5.56e-26;4!CL:0002595;5.15e-21;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,4.52e-50,2;CL:1000306,5.56e-26,4;CL:0002547,5.56e-26,4;CL:0002595,5.15e-21,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!3.30e-16!42;UBERON:0003509!3.30e-16!42;UBERON:0004572!3.30e-16!42;UBERON:0001310!3.42e-15!4;UBERON:0003834!1.59e-12!5;UBERON:0001533!1.59e-12!5;UBERON:0001981!3.35e-11!60;UBERON:0007500!3.35e-11!60;UBERON:0004537!3.35e-11!60;UBERON:0006965!3.35e-11!60;UBERON:0004573!6.87e-11!33;UBERON:0004571!6.87e-11!33;UBERON:0000914!2.46e-10!83;UBERON:0002329!2.46e-10!83;UBERON:0003077!2.46e-10!83;UBERON:0003059!2.46e-10!83;UBERON:0007282!2.46e-10!83;UBERON:0009618!2.46e-10!83;UBERON:0007285!2.46e-10!83;UBERON:0000055!1.13e-09!69;UBERON:0004290!1.65e-09!70;UBERON:0002456!1.29e-08!2;UBERON:0002049!2.23e-08!79;UBERON:0007798!2.23e-08!79;UBERON:0001529!2.48e-08!2;UBERON:0007204!2.48e-08!2;UBERON:0003513!3.63e-08!8;UBERON:0001134!3.72e-08!61;UBERON:0002036!3.72e-08!61;UBERON:0003082!3.72e-08!61;UBERON:0000486!4.90e-08!82;UBERON:0002385!6.92e-08!63;UBERON:0001015!6.92e-08!63;UBERON:0000383!6.92e-08!63;UBERON:0004872!7.60e-08!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;4.52e-50;2!UBERON:0004797;5.56e-26;4!UBERON:0000415;5.56e-26;4!UBERON:0007240;5.56e-26;4!UBERON:0005742;5.56e-26;4!UBERON:0005734;5.56e-26;4!UBERON:0004664;5.56e-26;4!UBERON:0004663;5.56e-26;4!UBERON:0003834;5.15e-21;5!UBERON:0001533;5.15e-21;5!UBERON:0003513;1.91e-15;7!UBERON:0004573;1.70e-11;33!UBERON:0004571;1.70e-11;33!UBERON:0001637;3.81e-10;42!UBERON:0003509;3.81e-10;42!UBERON:0004572;3.81e-10;42!UBERON:0007500;3.54e-08;56!UBERON:0001981;3.54e-08;56!UBERON:0004537;3.54e-08;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,4.52e-50,2;UBERON:0000415,5.56e-26,4;UBERON:0007240,5.56e-26,4;UBERON:0005742,5.56e-26,4;UBERON:0005734,5.56e-26,4;UBERON:0004664,5.56e-26,4;UBERON:0004663,5.56e-26,4;UBERON:0003834,5.15e-21,5;UBERON:0001533,5.15e-21,5;UBERON:0004797,1.65e-15,7;UBERON:0003513,1.91e-15,7;UBERON:0004573,2.96e-13,33;UBERON:0004571,2.96e-13,33;UBERON:0001637,1.07e-10,42;UBERON:0003509,1.07e-10,42;UBERON:0004572,1.07e-10,42;UBERON:0007500,5.66e-08,59;UBERON:0001981,5.66e-08,59;UBERON:0004537,5.66e-08,59;UBERON:0006965,5.66e-08,59;UBERON:0000055,4.47e-07,68 | |||
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|short_description=p@chr20:7755823..7755848,- | |||
}} | }} |
Latest revision as of 16:34, 28 July 2015
Short description: | p@chr20:7755823..7755848, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:7755823..7755848, - |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 4.52e-50 | 2 |
fibroblast of tunica adventitia of artery | 5.56e-26 | 4 |
fibroblast of the aortic adventitia | 5.56e-26 | 4 |
smooth muscle cell of the subclavian artery | 5.15e-21 | 5 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 4.52e-50 | 2 |
artery wall | 5.56e-26 | 4 |
tunica adventitia of artery | 5.56e-26 | 4 |
adventitia | 5.56e-26 | 4 |
tunica adventitia of blood vessel | 5.56e-26 | 4 |
aorta tunica adventitia | 5.56e-26 | 4 |
aorta wall | 5.56e-26 | 4 |
thoracic segment blood vessel | 5.15e-21 | 5 |
subclavian artery | 5.15e-21 | 5 |
blood vessel layer | 1.65e-15 | 7 |
trunk blood vessel | 1.91e-15 | 7 |
systemic artery | 2.96e-13 | 33 |
systemic arterial system | 2.96e-13 | 33 |
artery | 1.07e-10 | 42 |
arterial blood vessel | 1.07e-10 | 42 |
arterial system | 1.07e-10 | 42 |
epithelial tube open at both ends | 5.66e-08 | 59 |
blood vessel | 5.66e-08 | 59 |
blood vasculature | 5.66e-08 | 59 |
vascular cord | 5.66e-08 | 59 |
vessel | 4.47e-07 | 68 |