FFCP PHASE1:Hg19::chr20:9013530..9013537,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:9013530..9013537,- | |||
|coexpression_cluster_id=C530 | |coexpression_cluster_id=C530 | ||
|description=CAGE_peak_at_chr20:9013530..9013537,- | |description=CAGE_peak_at_chr20:9013530..9013537,- | ||
|id=chr20:9013530..9013537,- | |id=chr20:9013530..9013537,- | ||
|ontology_enrichment_celltype=CL:0000197!1.13e-08!6;CL:0000098!1.13e-08!6;CL:0002167!1.13e-08!6 | |ontology_enrichment_celltype=CL:0000197!1.13e-08!6;CL:0000098!1.13e-08!6;CL:0002167!1.13e-08!6 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.48e-40;5 | |||
|ontology_enrichment_disease=DOID:3112!1.61e-13!1 | |ontology_enrichment_disease=DOID:3112!1.61e-13!1 | ||
|ontology_enrichment_disease_v019=DOID:3112;5.42e-195;1!DOID:299;2.15e-09;25!DOID:7;2.32e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,5.42e-195,1;DOID:299,2.15e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.12e-21!9;UBERON:0002046!1.47e-10!5;UBERON:0004117!1.47e-10!5;UBERON:0007689!1.47e-10!5;UBERON:0007123!1.47e-10!5;UBERON:0003091!1.47e-10!5;UBERON:0001557!4.20e-10!19;UBERON:0008947!1.40e-07!38;UBERON:0003258!1.40e-07!38 | |ontology_enrichment_uberon=UBERON:0001737!5.12e-21!9;UBERON:0002046!1.47e-10!5;UBERON:0004117!1.47e-10!5;UBERON:0007689!1.47e-10!5;UBERON:0007123!1.47e-10!5;UBERON:0003091!1.47e-10!5;UBERON:0001557!4.20e-10!19;UBERON:0008947!1.40e-07!38;UBERON:0003258!1.40e-07!38 | ||
|ontology_enrichment_uberon_v019=UBERON:0002046;1.48e-40;5!UBERON:0002368;4.53e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,1.48e-40,5;UBERON:0004117,1.48e-40,5;UBERON:0007689,1.48e-40,5;UBERON:0007123,1.48e-40,5;UBERON:0003091,1.48e-40,5;UBERON:0009722,2.25e-19,11;UBERON:0007690,2.25e-19,11;UBERON:0008814,1.85e-12,18;UBERON:0002368,4.03e-07,35 | |||
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|short_description=p@chr20:9013530..9013537,- | |short_description=p@chr20:9013530..9013537,- | ||
}} | }} |
Latest revision as of 16:37, 28 July 2015
Short description: | p@chr20:9013530..9013537, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:9013530..9013537, - |
Coexpression cluster: | C530_papillary_salivary_skin_Smooth_leiomyoma_lung_Keratinocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thyroid gland | 1.48e-40 | 5 |
pharyngeal pouch | 1.48e-40 | 5 |
thyroid diverticulum | 1.48e-40 | 5 |
pharyngeal pouch 2 | 1.48e-40 | 5 |
thyroid primordium | 1.48e-40 | 5 |
entire pharyngeal arch endoderm | 2.25e-19 | 11 |
early pharyngeal endoderm | 2.25e-19 | 11 |
pharyngeal arch system | 1.85e-12 | 18 |
endocrine gland | 4.03e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 5.42e-195 | 1 |
adenocarcinoma | 2.15e-09 | 25 |