FFCP PHASE1:Hg19::chr21:9831035..9831065,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr21:9831035..9831065,+
|short_description=p@chr21:9831035..9831065,+
|description=CAGE_peak_at_chr21:9831035..9831065,+
|association_with_transcript=NA
|Entr...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr21:9831035..9831065,+ | |||
|coexpression_cluster_id=C1074 | |||
|description=CAGE_peak_at_chr21:9831035..9831065,+ | |||
|id=chr21:9831035..9831065,+ | |||
|ontology_enrichment_celltype=CL:0000039!3.65e-14!7;CL:0000586!3.65e-14!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;6.93e-18;7!CL:0000586;6.93e-18;7!CL:0000167;6.98e-09;1!CL:0000164;6.98e-09;1!CL:0000502;6.98e-09;1!CL:0000172;6.98e-09;1!CL:0000173;6.98e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,6.80e-18,7;CL:0000586,6.80e-18,7;CL:0000167,6.72e-09,1;CL:0000164,6.72e-09,1;CL:0000502,6.72e-09,1;CL:0000172,6.72e-09,1;CL:0000173,6.72e-09,1;CL:0002351,6.72e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.39e-12;10!UBERON:0005564;1.39e-12;10!CL:0002351;6.98e-09;1!UBERON:0004161;4.64e-07;11 | |||
|ontology_enrichment_disease=DOID:14566!2.31e-15!239;DOID:162!3.82e-14!235;DOID:0050687!5.27e-14!143;DOID:305!1.99e-11!106;DOID:1036!1.89e-08!8;DOID:0050615!5.39e-07!16;DOID:3095!7.75e-07!22;DOID:2994!7.75e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:4430;6.98e-09;1!DOID:3095;1.36e-08;22!DOID:2994;1.36e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,4.47e-16,143;DOID:14566,1.58e-14,239;DOID:162,1.79e-13,235;DOID:305,1.07e-11,106;DOID:4430,6.72e-09,1;DOID:3095,1.34e-08,22;DOID:2994,1.34e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.80e-08!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.12e-15;8!UBERON:0003135;1.86e-11;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.49e-15,8;UBERON:0003135,2.29e-11,11 | |||
|phase1_expression=0,0.856402095563933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0.280660094433074,0,0,0,0,0.154209693802656,0,0,0.519254429183621,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67986696238627,0.809262246844399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,1.22520107990516,0,0,0,0,3.19326994292507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39203086947621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76352923497993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93448862085349,0,1.89110145414349,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,1.84451123510448,0.807818799687949,0.434589487688032,0,0,0,0,0,0,0.902382642468723,1.17637520590644,0.671286347903371,6.64138064534648,0,2.3209787098083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94224303627274,0,0,0,0,0,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794858446811959,0,0,0,0,0,0,0.343609788497747,1.20116498503375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,2.6786281984456,3.54388191039016,4.85305515750131,0.78741985211799,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0.717149357331379,0,0,0,0,0,0,0,0,0.328370082997356,0.340776043570843,0,0,0,0,0,0.684347351537318,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,5.70930667089935,0,0.936669811613763,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,2.04993214870357,0.345430341731199,0,0,0,0,0,0,0.983091635014877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0255760305528,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,1.02256085710989,0,0,0,0,0.894843454382338,0,0,0.647428837187895,0,0,0,0,0,1.9027214524411,0,0,0.150962843566674,0,0,0,0,1.64973582971138,0,0,0,0,0,0,0,0,0,0.160482733378337,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0.764859003745869,0,2.95767606251747,0,1.10273879441814,3.50990555009325,0.0757786982182394,1.07185652062471,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0.856402095563933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0.280660094433074,0,0,0,0,0.154209693802656,0,0,0.519254429183621,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67986696238627,0.809262246844399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,1.22520107990516,0,0,0,0,3.19326994292507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39203086947621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76352923497993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93448862085349,0,1.89110145414349,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,1.84451123510448,0.807818799687949,0.434589487688032,0,0,0,0,0,0,0.902382642468723,1.17637520590644,0.671286347903371,6.64138064534648,0,2.3209787098083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94224303627274,0,0,0,0,0,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794858446811959,0,0,0,0,0,0,0.343609788497747,1.20116498503375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,2.6786281984456,3.54388191039016,4.85305515750131,0.78741985211799,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0.717149357331379,0,0,0,0,0,0,0,0,0.328370082997356,0.340776043570843,0,0,0,0,0,0.684347351537318,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,5.70930667089935,0,0.936669811613763,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,2.04993214870357,0.345430341731199,0,0,0,0,0,0,0.983091635014877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0255760305528,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,1.02256085710989,0,0,0,0,0.894843454382338,0,0,0.647428837187895,0,0,0,0,0,1.9027214524411,0,0,0.150962843566674,0,0,0,0,1.64973582971138,0,0,0,0,0,0,0,0,0,0.160482733378337,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0.764859003745869,0,2.95767606251747,0,1.10273879441814,3.50990555009325,0.0757786982182394,1.07185652062471,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr21:9831035..9831065,+ | |||
}} | }} |
Latest revision as of 18:54, 28 July 2015
Short description: | p@chr21:9831035..9831065, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:9831035..9831065, + |
Coexpression cluster: | C1074_chronic_testicular_melanoma_hepatocellular_pagetoid_acute_Small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 6.80e-18 | 7 |
germ cell | 6.80e-18 | 7 |
peptide hormone secreting cell | 6.72e-09 | 1 |
enteroendocrine cell | 6.72e-09 | 1 |
type D enteroendocrine cell | 6.72e-09 | 1 |
somatostatin secreting cell | 6.72e-09 | 1 |
pancreatic D cell | 6.72e-09 | 1 |
progenitor cell of endocrine pancreas | 6.72e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 1.49e-15 | 8 |
male reproductive organ | 2.29e-11 | 11 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 4.47e-16 | 143 |
disease of cellular proliferation | 1.58e-14 | 239 |
cancer | 1.79e-13 | 235 |
carcinoma | 1.07e-11 | 106 |
somatostatinoma | 6.72e-09 | 1 |
germ cell and embryonal cancer | 1.34e-08 | 22 |
germ cell cancer | 1.34e-08 | 22 |