FFCP PHASE1:Hg19::chr22:22677154..22677164,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=46bp_to_AY998676_5end | |association_with_transcript=46bp_to_AY998676_5end | ||
|cluster_id=chr22:22677154..22677164,+ | |||
|description=CAGE_peak_2_at_AY998676_5end | |description=CAGE_peak_2_at_AY998676_5end | ||
|id=chr22:22677154..22677164,+ | |id=chr22:22677154..22677164,+ | ||
|ontology_enrichment_celltype=CL:0000236!3.54e-23!14;CL:0000945!5.36e-13!24;CL:0000826!5.36e-13!24 | |ontology_enrichment_celltype=CL:0000236!3.54e-23!14;CL:0000945!5.36e-13!24;CL:0000826!5.36e-13!24 | ||
|ontology_enrichment_celltype_v019=CL:0000236;3.41e-13;13!CL:0000945;2.04e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.26e-12,14;CL:0000945,1.84e-07,24;CL:0000826,1.84e-07,24 | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.71e-19;1!UBERON:0006298;2.71e-19;1!UBERON:0006242;2.71e-19;1!UBERON:0004872;2.98e-11;7!UBERON:0006965;2.48e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.35e-29!115;UBERON:0002106!8.48e-08!3;UBERON:0004854!8.48e-08!3;UBERON:0009034!8.48e-08!3;UBERON:0002095!8.48e-08!3;UBERON:0004782!8.48e-08!3;UBERON:0003281!8.48e-08!3;UBERON:0009664!8.48e-08!3;UBERON:0002296!8.48e-08!3;UBERON:0005602!8.48e-08!3;UBERON:0001179!8.48e-08!3;UBERON:0006293!8.48e-08!3;UBERON:0001154!9.15e-07!1;UBERON:0001153!9.15e-07!1;UBERON:0001736!9.67e-07!1;UBERON:0006298!9.67e-07!1 | |ontology_enrichment_uberon=UBERON:0007023!2.35e-29!115;UBERON:0002106!8.48e-08!3;UBERON:0004854!8.48e-08!3;UBERON:0009034!8.48e-08!3;UBERON:0002095!8.48e-08!3;UBERON:0004782!8.48e-08!3;UBERON:0003281!8.48e-08!3;UBERON:0009664!8.48e-08!3;UBERON:0002296!8.48e-08!3;UBERON:0005602!8.48e-08!3;UBERON:0001179!8.48e-08!3;UBERON:0006293!8.48e-08!3;UBERON:0001154!9.15e-07!1;UBERON:0001153!9.15e-07!1;UBERON:0001736!9.67e-07!1;UBERON:0006298!9.67e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001154;2.71e-19;1!UBERON:0001736;2.71e-19;1!UBERON:0001153;2.71e-19;1!UBERON:0009854;2.71e-19;1!UBERON:0001829;2.48e-10;2!UBERON:0002106;2.63e-07;3!UBERON:0002110;2.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,4.69e-19,1;UBERON:0001153,4.69e-19,1;UBERON:0001045,4.69e-19,1;UBERON:0001736,5.62e-19,1;UBERON:0006298,5.62e-19,1;UBERON:0001829,3.58e-10,2;UBERON:0007023,1.26e-09,114;UBERON:0002106,2.79e-07,3;UBERON:0004854,2.79e-07,3;UBERON:0009034,2.79e-07,3;UBERON:0002095,2.79e-07,3;UBERON:0004782,2.79e-07,3;UBERON:0003281,2.79e-07,3;UBERON:0009664,2.79e-07,3;UBERON:0002296,2.79e-07,3;UBERON:0005602,2.79e-07,3;UBERON:0001179,2.79e-07,3;UBERON:0006293,2.79e-07,3;UBERON:0002110,2.97e-07,3;UBERON:0006242,2.97e-07,3;UBERON:0005409,8.04e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,2.66852776159066,0.426730222566507,1.60158394814405,0.574752439954483,0.661044872784862,1.90810750907073,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,1.38141957765574,0,0,0,0,0,0,0,0.591860433821602,2.3948309234694,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538651809526579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.678923115418936,0,0,0,0,0,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,1.60181118851542,0,0.828478110694391,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77500563648273,0,0,0,0,0,0,0,0,1.50374268767766,0.0644578879735772,0,0,0,0,0,1.37618785021362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0.5388164241167,0.215166616178029,0,0,0,0,0,0,0,0,0,1.81146414231924,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,2.66852776159066,0.426730222566507,1.60158394814405,0.574752439954483,0.661044872784862,1.90810750907073,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,1.38141957765574,0,0,0,0,0,0,0,0.591860433821602,2.3948309234694,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538651809526579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.678923115418936,0,0,0,0,0,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,1.60181118851542,0,0.828478110694391,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77500563648273,0,0,0,0,0,0,0,0,1.50374268767766,0.0644578879735772,0,0,0,0,0,1.37618785021362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0.5388164241167,0.215166616178029,0,0,0,0,0,0,0,0,0,1.81146414231924,0 | ||
|short_description=p2@AY998676 | |short_description=p2@AY998676 | ||
}} | }} |
Latest revision as of 19:23, 28 July 2015
Short description: | p2@AY998676 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AY998676_5end |
Coexpression cluster: | NA |
Association with transcript: | 46bp_to_AY998676_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.26e-12 | 14 |
lymphocyte of B lineage | 1.84e-07 | 24 |
pro-B cell | 1.84e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 4.69e-19 | 1 |
caecum | 4.69e-19 | 1 |
midgut | 4.69e-19 | 1 |
submandibular gland | 5.62e-19 | 1 |
submandibular gland primordium | 5.62e-19 | 1 |
major salivary gland | 3.58e-10 | 2 |
adult organism | 1.26e-09 | 114 |
spleen | 2.79e-07 | 3 |
gastrointestinal system mesentery | 2.79e-07 | 3 |
stomach region | 2.79e-07 | 3 |
mesentery | 2.79e-07 | 3 |
gastrointestinal system serosa | 2.79e-07 | 3 |
mesentery of stomach | 2.79e-07 | 3 |
gut mesentery | 2.79e-07 | 3 |
dorsal mesentery | 2.79e-07 | 3 |
dorsal mesogastrium | 2.79e-07 | 3 |
peritoneal cavity | 2.79e-07 | 3 |
spleen primordium | 2.79e-07 | 3 |
gallbladder | 2.97e-07 | 3 |
gall bladder primordium | 2.97e-07 | 3 |
gastrointestinal system | 8.04e-07 | 25 |