FFCP PHASE1:Hg19::chr22:23198715..23198738,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000385097_5end | |association_with_transcript=0bp_to_ENST00000385097_5end | ||
|cluster_id=chr22:23198715..23198738,+ | |||
|coexpression_cluster_id=C36 | |coexpression_cluster_id=C36 | ||
|description=CAGE_peak_1_at_ENST00000385097_5end | |description=CAGE_peak_1_at_ENST00000385097_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!9.56e-43!24;CL:0000826!9.56e-43!24;CL:0000236!1.09e-35!14;CL:0000838!8.96e-19!52;CL:0000542!2.57e-18!53;CL:0000051!2.57e-18!53;CL:0002087!3.41e-10!119;CL:0000842!6.98e-09!3;CL:0000738!9.51e-08!140;CL:0002031!4.97e-07!124;CL:0000224!9.20e-07!4 | |ontology_enrichment_celltype=CL:0000945!9.56e-43!24;CL:0000826!9.56e-43!24;CL:0000236!1.09e-35!14;CL:0000838!8.96e-19!52;CL:0000542!2.57e-18!53;CL:0000051!2.57e-18!53;CL:0002087!3.41e-10!119;CL:0000842!6.98e-09!3;CL:0000738!9.51e-08!140;CL:0002031!4.97e-07!124;CL:0000224!9.20e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000236;8.60e-52;13!CL:0000945;2.71e-51;24!CL:0000542;9.94e-16;53 | |ontology_enrichment_celltype_v019=CL:0000236;8.60e-52;13!CL:0000945;2.71e-51;24!CL:0000542;9.94e-16;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.97e-51,24;CL:0000826,2.97e-51,24;CL:0000236,6.80e-48,14;CL:0000838,6.62e-22,52;CL:0000542,1.97e-21,53;CL:0000051,1.97e-21,53;CL:0002087,4.55e-08,115;CL:0002031,1.31e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;9.94e-16;53!UBERON:0004872;1.23e-07;7!UBERON:0001045;7.79e-07;1 | |ontology_enrichment_development_v019=CL:0000051;9.94e-16;53!UBERON:0004872;1.23e-07;7!UBERON:0001045;7.79e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.34e-26!115;UBERON:0002106!6.62e-10!3;UBERON:0004854!6.62e-10!3;UBERON:0009034!6.62e-10!3;UBERON:0002095!6.62e-10!3;UBERON:0004782!6.62e-10!3;UBERON:0003281!6.62e-10!3;UBERON:0009664!6.62e-10!3;UBERON:0002296!6.62e-10!3;UBERON:0005602!6.62e-10!3;UBERON:0001179!6.62e-10!3;UBERON:0006293!6.62e-10!3;UBERON:0000178!1.75e-08!15;UBERON:0000179!1.75e-08!15;UBERON:0000463!1.75e-08!15;UBERON:0004177!4.57e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!1.34e-26!115;UBERON:0002106!6.62e-10!3;UBERON:0004854!6.62e-10!3;UBERON:0009034!6.62e-10!3;UBERON:0002095!6.62e-10!3;UBERON:0004782!6.62e-10!3;UBERON:0003281!6.62e-10!3;UBERON:0009664!6.62e-10!3;UBERON:0002296!6.62e-10!3;UBERON:0005602!6.62e-10!3;UBERON:0001179!6.62e-10!3;UBERON:0006293!6.62e-10!3;UBERON:0000178!1.75e-08!15;UBERON:0000179!1.75e-08!15;UBERON:0000463!1.75e-08!15;UBERON:0004177!4.57e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.29e-10;33!UBERON:0001155;4.55e-10;9!UBERON:0002106;2.01e-08;3!UBERON:0000059;2.96e-08;11!UBERON:0000160;1.64e-07;17!UBERON:0002372;3.67e-07;1!UBERON:0001961;3.67e-07;1!UBERON:0001744;3.67e-07;1!UBERON:0001042;3.67e-07;1!UBERON:0001735;3.67e-07;1!UBERON:0000029;4.38e-07;1!UBERON:0001154;7.79e-07;1!UBERON:0001153;7.79e-07;1!UBERON:0009854;7.79e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0004921;1.29e-10;33!UBERON:0001155;4.55e-10;9!UBERON:0002106;2.01e-08;3!UBERON:0000059;2.96e-08;11!UBERON:0000160;1.64e-07;17!UBERON:0002372;3.67e-07;1!UBERON:0001961;3.67e-07;1!UBERON:0001744;3.67e-07;1!UBERON:0001042;3.67e-07;1!UBERON:0001735;3.67e-07;1!UBERON:0000029;4.38e-07;1!UBERON:0001154;7.79e-07;1!UBERON:0001153;7.79e-07;1!UBERON:0009854;7.79e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.03e-13,114;UBERON:0001155,4.50e-10,9;UBERON:0005409,1.34e-09,25;UBERON:0002106,2.08e-08,3;UBERON:0004854,2.08e-08,3;UBERON:0009034,2.08e-08,3;UBERON:0002095,2.08e-08,3;UBERON:0004782,2.08e-08,3;UBERON:0003281,2.08e-08,3;UBERON:0009664,2.08e-08,3;UBERON:0002296,2.08e-08,3;UBERON:0005602,2.08e-08,3;UBERON:0001179,2.08e-08,3;UBERON:0006293,2.08e-08,3;UBERON:0000059,2.93e-08,11;UBERON:0000160,1.67e-07,17;UBERON:0002372,3.57e-07,1;UBERON:0001961,3.57e-07,1;UBERON:0001744,3.57e-07,1;UBERON:0001735,3.57e-07,1;UBERON:0000029,4.25e-07,1;UBERON:0001154,7.15e-07,1;UBERON:0001153,7.15e-07,1;UBERON:0001045,7.15e-07,1 | |||
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| ||
|short_description=p1@ENST00000385097 | |short_description=p1@ENST00000385097 | ||
}} | }} |
Latest revision as of 19:26, 28 July 2015
Short description: | p1@ENST00000385097 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000385097_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | 0bp_to_ENST00000385097_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.97e-51 | 24 |
pro-B cell | 2.97e-51 | 24 |
B cell | 6.80e-48 | 14 |
lymphoid lineage restricted progenitor cell | 6.62e-22 | 52 |
lymphocyte | 1.97e-21 | 53 |
common lymphoid progenitor | 1.97e-21 | 53 |
nongranular leukocyte | 4.55e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 1.31e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.03e-13 | 114 |
colon | 4.50e-10 | 9 |
gastrointestinal system | 1.34e-09 | 25 |
spleen | 2.08e-08 | 3 |
gastrointestinal system mesentery | 2.08e-08 | 3 |
stomach region | 2.08e-08 | 3 |
mesentery | 2.08e-08 | 3 |
gastrointestinal system serosa | 2.08e-08 | 3 |
mesentery of stomach | 2.08e-08 | 3 |
gut mesentery | 2.08e-08 | 3 |
dorsal mesentery | 2.08e-08 | 3 |
dorsal mesogastrium | 2.08e-08 | 3 |
peritoneal cavity | 2.08e-08 | 3 |
spleen primordium | 2.08e-08 | 3 |
large intestine | 2.93e-08 | 11 |
intestine | 1.67e-07 | 17 |
tonsil | 3.57e-07 | 1 |
mucosa-associated lymphoid tissue | 3.57e-07 | 1 |
lymphoid tissue | 3.57e-07 | 1 |
tonsillar ring | 3.57e-07 | 1 |
lymph node | 4.25e-07 | 1 |
vermiform appendix | 7.15e-07 | 1 |
caecum | 7.15e-07 | 1 |
midgut | 7.15e-07 | 1 |