FFCP PHASE1:Hg19::chr22:23227695..23227702,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr22:23227695..23227702,-
|short_description=p@chr22:23227695..23227702,-
|description=CAGE_peak_at_chr22:23227695..23227702,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr22:23227695..23227702,- | |||
|coexpression_cluster_id=C218 | |||
|description=CAGE_peak_at_chr22:23227695..23227702,- | |||
|id=chr22:23227695..23227702,- | |||
|ontology_enrichment_celltype=CL:0000945!1.22e-07!24;CL:0000826!1.22e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.09e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.55e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.07e-23;1!UBERON:0006595;5.16e-07;86 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.17e-31!115;UBERON:0001829!3.35e-12!2;UBERON:0001044!4.25e-09!6;UBERON:0003293!4.25e-09!6;UBERON:0003294!4.25e-09!6;UBERON:0010047!4.25e-09!6;UBERON:0000167!4.25e-09!6;UBERON:0004921!1.30e-08!129;UBERON:0004185!1.30e-08!129;UBERON:0002106!2.64e-08!3;UBERON:0004854!2.64e-08!3;UBERON:0009034!2.64e-08!3;UBERON:0002095!2.64e-08!3;UBERON:0004782!2.64e-08!3;UBERON:0003281!2.64e-08!3;UBERON:0009664!2.64e-08!3;UBERON:0002296!2.64e-08!3;UBERON:0005602!2.64e-08!3;UBERON:0001179!2.64e-08!3;UBERON:0006293!2.64e-08!3;UBERON:0000078!1.26e-07!18;UBERON:0001154!2.95e-07!1;UBERON:0001153!2.95e-07!1;UBERON:0002372!3.52e-07!1;UBERON:0001961!3.52e-07!1;UBERON:0001744!3.52e-07!1;UBERON:0001735!3.52e-07!1;UBERON:0000029!3.73e-07!1;UBERON:0001736!5.26e-07!1;UBERON:0006298!5.26e-07!1;UBERON:0001831!7.39e-07!1;UBERON:0001567!7.39e-07!1;UBERON:0008801!7.39e-07!1;UBERON:0000161!7.67e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;1.07e-23;1!UBERON:0001153;1.07e-23;1!UBERON:0009854;1.07e-23;1!UBERON:0002372;1.87e-23;1!UBERON:0001961;1.87e-23;1!UBERON:0001744;1.87e-23;1!UBERON:0001042;1.87e-23;1!UBERON:0001735;1.87e-23;1!UBERON:0000029;4.10e-23;1!UBERON:0006562;1.96e-12;2!UBERON:0003127;2.90e-12;2!UBERON:0001155;7.96e-11;9!UBERON:0002465;8.64e-10;10!UBERON:0004921;8.86e-10;33!UBERON:0000059;5.00e-09;11!UBERON:0002106;1.00e-08;3!UBERON:0002405;5.12e-08;27!UBERON:0009856;6.50e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,1.07e-23,1;UBERON:0001153,1.07e-23,1;UBERON:0001045,1.07e-23,1;UBERON:0002372,2.10e-23,1;UBERON:0001961,2.10e-23,1;UBERON:0001744,2.10e-23,1;UBERON:0001735,2.10e-23,1;UBERON:0000029,2.62e-23,1;UBERON:0003127,2.59e-12,2;UBERON:0001155,8.37e-11,9;UBERON:0002465,8.09e-10,10;UBERON:0007023,2.22e-09,114;UBERON:0000059,5.20e-09,11;UBERON:0002106,9.66e-09,3;UBERON:0004854,9.66e-09,3;UBERON:0009034,9.66e-09,3;UBERON:0002095,9.66e-09,3;UBERON:0004782,9.66e-09,3;UBERON:0003281,9.66e-09,3;UBERON:0009664,9.66e-09,3;UBERON:0002296,9.66e-09,3;UBERON:0005602,9.66e-09,3;UBERON:0001179,9.66e-09,3;UBERON:0006293,9.66e-09,3;UBERON:0005409,2.52e-08,25 | |||
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|short_description=p@chr22:23227695..23227702,- | |||
}} | }} |
Latest revision as of 19:26, 28 July 2015
Short description: | p@chr22:23227695..23227702, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:23227695..23227702, - |
Coexpression cluster: | C218_tonsil_lymph_CD19_spleen_colon_appendix_salivary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.55e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 1.07e-23 | 1 |
caecum | 1.07e-23 | 1 |
midgut | 1.07e-23 | 1 |
tonsil | 2.10e-23 | 1 |
mucosa-associated lymphoid tissue | 2.10e-23 | 1 |
lymphoid tissue | 2.10e-23 | 1 |
tonsillar ring | 2.10e-23 | 1 |
lymph node | 2.62e-23 | 1 |
open tracheal system trachea | 2.59e-12 | 2 |
colon | 8.37e-11 | 9 |
lymphoid system | 8.09e-10 | 10 |
adult organism | 2.22e-09 | 114 |
large intestine | 5.20e-09 | 11 |
spleen | 9.66e-09 | 3 |
gastrointestinal system mesentery | 9.66e-09 | 3 |
stomach region | 9.66e-09 | 3 |
mesentery | 9.66e-09 | 3 |
gastrointestinal system serosa | 9.66e-09 | 3 |
mesentery of stomach | 9.66e-09 | 3 |
gut mesentery | 9.66e-09 | 3 |
dorsal mesentery | 9.66e-09 | 3 |
dorsal mesogastrium | 9.66e-09 | 3 |
peritoneal cavity | 9.66e-09 | 3 |
spleen primordium | 9.66e-09 | 3 |
gastrointestinal system | 2.52e-08 | 25 |