FFCP PHASE1:Hg19::chr22:27618696..27618719,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:27618696..27618719,- | |||
|coexpression_cluster_id=C2641 | |coexpression_cluster_id=C2641 | ||
|description=CAGE_peak_at_chr22:27618696..27618719,- | |description=CAGE_peak_at_chr22:27618696..27618719,- | ||
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|ontology_enrichment_celltype=CL:0000077!1.76e-13!19;CL:0000057!8.13e-12!75;CL:0002620!9.16e-09!23;CL:0000055!2.53e-07!180 | |ontology_enrichment_celltype=CL:0000077!1.76e-13!19;CL:0000057!8.13e-12!75;CL:0002620!9.16e-09!23;CL:0000055!2.53e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000077;6.22e-29;19!CL:0000064;1.13e-14;3!CL:0000067;1.13e-14;3!CL:0005012;1.13e-14;3!CL:0002304;1.13e-14;3!CL:1000306;2.06e-11;4!CL:0002547;2.06e-11;4!CL:0002097;2.35e-10;2!CL:0002580;1.61e-07;3!CL:0000174;3.52e-07;3!CL:0002620;5.44e-07;23 | |ontology_enrichment_celltype_v019=CL:0000077;6.22e-29;19!CL:0000064;1.13e-14;3!CL:0000067;1.13e-14;3!CL:0005012;1.13e-14;3!CL:0002304;1.13e-14;3!CL:1000306;2.06e-11;4!CL:0002547;2.06e-11;4!CL:0002097;2.35e-10;2!CL:0002580;1.61e-07;3!CL:0000174;3.52e-07;3!CL:0002620;5.44e-07;23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000077,2.30e-29,19;CL:0000064,4.15e-14,3;CL:0000067,4.15e-14,3;CL:0005012,4.15e-14,3;CL:0002304,4.15e-14,3;CL:0000057,1.32e-12,76;CL:1000306,2.11e-11,4;CL:0002547,2.11e-11,4;CL:0002097,1.53e-10,2;CL:0000213,3.84e-08,58;CL:0000215,3.84e-08,58;CL:0002580,1.49e-07,3;CL:0000076,2.49e-07,63;CL:0000174,2.66e-07,3;CL:0002620,6.57e-07,23;CL:0002334,9.31e-07,12 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!5.25e-10!14;DOID:17!1.43e-07!5;DOID:450!1.43e-07!5;DOID:66!1.43e-07!5;DOID:423!1.43e-07!5;DOID:0080000!1.43e-07!5;DOID:11722!1.43e-07!5 | |ontology_enrichment_disease=DOID:2394!5.25e-10!14;DOID:17!1.43e-07!5;DOID:450!1.43e-07!5;DOID:66!1.43e-07!5;DOID:423!1.43e-07!5;DOID:0080000!1.43e-07!5;DOID:11722!1.43e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.99e-08;14 | |ontology_enrichment_disease_v019=DOID:2394;1.99e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,1.61e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002118!5.90e-07!5;UBERON:0004532!5.90e-07!5;UBERON:0007625!5.99e-07!11;UBERON:0002200!6.31e-07!11;UBERON:0006876!6.31e-07!11 | |ontology_enrichment_uberon=UBERON:0002118!5.90e-07!5;UBERON:0004532!5.90e-07!5;UBERON:0007625!5.99e-07!11;UBERON:0002200!6.31e-07!11;UBERON:0006876!6.31e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0001778;1.13e-14;3!UBERON:0001775;1.13e-14;3!UBERON:0004797;2.06e-11;4!UBERON:0000415;2.06e-11;4!UBERON:0007240;2.06e-11;4!UBERON:0005742;2.06e-11;4!UBERON:0005734;2.06e-11;4!UBERON:0004664;2.06e-11;4!UBERON:0004663;2.06e-11;4!UBERON:0000488;3.91e-11;4!UBERON:0002203;1.42e-07;6!UBERON:0001768;1.42e-07;6!UBERON:0002200;1.42e-07;6!UBERON:0002369;3.52e-07;3!UBERON:0001235;3.52e-07;3!UBERON:0006858;3.52e-07;3!UBERON:0007625;5.63e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0001778;1.13e-14;3!UBERON:0001775;1.13e-14;3!UBERON:0004797;2.06e-11;4!UBERON:0000415;2.06e-11;4!UBERON:0007240;2.06e-11;4!UBERON:0005742;2.06e-11;4!UBERON:0005734;2.06e-11;4!UBERON:0004664;2.06e-11;4!UBERON:0004663;2.06e-11;4!UBERON:0000488;3.91e-11;4!UBERON:0002203;1.42e-07;6!UBERON:0001768;1.42e-07;6!UBERON:0002200;1.42e-07;6!UBERON:0002369;3.52e-07;3!UBERON:0001235;3.52e-07;3!UBERON:0006858;3.52e-07;3!UBERON:0007625;5.63e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,4.15e-14,3;UBERON:0001775,4.15e-14,3;UBERON:0000415,2.11e-11,4;UBERON:0007240,2.11e-11,4;UBERON:0005742,2.11e-11,4;UBERON:0005734,2.11e-11,4;UBERON:0004664,2.11e-11,4;UBERON:0004663,2.11e-11,4;UBERON:0000488,1.03e-10,4;UBERON:0002369,2.66e-07,3;UBERON:0001235,2.66e-07,3;UBERON:0006858,2.66e-07,3;UBERON:0002203,2.66e-07,6;UBERON:0001768,2.66e-07,6;UBERON:0002200,2.66e-07,6;UBERON:0007625,8.72e-07,11 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.845726424575827,0,0.893922188854576,0.872338524100369,0,0,0,0.245733936501509,0,2.18441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03988298880475,1.10864698731282,1.05401742831751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.379891534993739,2.25095607382472,1.72101972449288,1.06400514659507,0,1.06748995729705,0.49333509683432,0,0,0.326923806226917,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4351170855109,0.85422955527427,0.635795703478686,2.40072876867522,0.721367704669072,1.03056216018252,0.744467425326359,1.18143432568886,0.487185025805993,3.02920529092937,0.644349290496095,0.161646056818812,1.06502877754984,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74384027533312,0.1466765716419,0.775630294546667,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,1.50719688529793,0,8.29775826811074,0,0,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0.415941723061614,0,0.157702415033935,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0.907170879989041,1.24053903909388,3.37616341233737,0.280660094433074,1.40953064181271,0.511707249066704,0.965123526861645,2.96836132889982,0,0.177561725313127,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0,0.640986253728404,0.495056999523528,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0.170453254832202,0.178064071293475,0,0,0,0,0.464845549297286,0.94443704049192,0,0,0,0,0,0,0.744316738719335,0.316379424718726,0.571890581771475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0.294747123039363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0.994147647766298,0,0.111308705022906,0,0,0,0,0,0.818149460017238,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0.797594390929008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0,0.067401132980677,0,0,0,0,0,0.789168805698781,2.41981432097328,0.30607276163049,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0.561111741760736,0,0,0,0,0,0,0,0,0.407712618220842,0.104602846312333,0.101998217636322,0,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393709926058995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,1.19730191562487,0,0.511164065356265,0.226624183040251,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665574309221114,0.0620964029413835,0,0,0,0,0,0,0,0.298509605773748,0.934853239388898,0,0.568209015825267,0,0,0,0,0.466311601748341,0,0.159296767163702,0.449803112163605,0.465788870628778,0,2.65841714557995,0,1.35231848097497,2.66563648518157,0.813741466409323,0.181848659202559,1.39633724155235,0.464033759878494,1.19428766609585,0,0.686791410365586,0.673498977531838,0,1.15571898244382,1.92997432237433,0.782982875895635,2.493765180635,1.62065732026684,0.97894681802587,13.610751922193,0.617602894321944,3.28926074368061,0,1.3503982678964,1.8583668471838,0,0,2.12701969324168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0.183428598521679,0.231051332300676,0.381382095467167,0,0,0.225630985047772,8.0682027481408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0.431855182437243,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0.371995018166751,0,2.16313281061895,0,0,0,0,0,0,0,0.0757786982182394,0.803892390468535,0,0,0.213233981900981,0,0,0,0.224263725161227,0,0.202117188958219,0,0,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 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| ||
|short_description=p@chr22:27618696..27618719,- | |short_description=p@chr22:27618696..27618719,- | ||
}} | }} |
Latest revision as of 19:50, 28 July 2015
Short description: | p@chr22:27618696..27618719, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:27618696..27618719, - |
Coexpression cluster: | C2641_mesothelioma_pagetoid_Mesothelial_Placental_mesenchymal_astrocytoma_lens |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 2.30e-29 | 19 |
ciliated cell | 4.15e-14 | 3 |
ciliated epithelial cell | 4.15e-14 | 3 |
multi-ciliated epithelial cell | 4.15e-14 | 3 |
non-pigmented ciliary epithelial cell | 4.15e-14 | 3 |
fibroblast | 1.32e-12 | 76 |
fibroblast of tunica adventitia of artery | 2.11e-11 | 4 |
fibroblast of the aortic adventitia | 2.11e-11 | 4 |
cortical cell of adrenal gland | 1.53e-10 | 2 |
lining cell | 3.84e-08 | 58 |
barrier cell | 3.84e-08 | 58 |
preadipocyte of the breast | 1.49e-07 | 3 |
squamous epithelial cell | 2.49e-07 | 63 |
steroid hormone secreting cell | 2.66e-07 | 3 |
skin fibroblast | 6.57e-07 | 23 |
preadipocyte | 9.31e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 4.15e-14 | 3 |
ciliary body | 4.15e-14 | 3 |
artery wall | 2.11e-11 | 4 |
tunica adventitia of artery | 2.11e-11 | 4 |
adventitia | 2.11e-11 | 4 |
tunica adventitia of blood vessel | 2.11e-11 | 4 |
aorta tunica adventitia | 2.11e-11 | 4 |
aorta wall | 2.11e-11 | 4 |
atypical epithelium | 1.03e-10 | 4 |
adrenal gland | 2.66e-07 | 3 |
adrenal cortex | 2.66e-07 | 3 |
adrenal/interrenal gland | 2.66e-07 | 3 |
vasculature of eye | 2.66e-07 | 6 |
uvea | 2.66e-07 | 6 |
vasculature of head | 2.66e-07 | 6 |
pigment epithelium of eye | 8.72e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.61e-08 | 14 |