FFCP PHASE1:Hg19::chr22:46001308..46001315,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=185bp_to_ENST00000422971,uc003bgl.1_5end | |association_with_transcript=185bp_to_ENST00000422971,uc003bgl.1_5end | ||
|cluster_id=chr22:46001308..46001315,- | |||
|description=CAGE_peak_1_at_ENST00000422971_5end,CAGE_peak_1_at_uc003bgl.1_5end | |description=CAGE_peak_1_at_ENST00000422971_5end,CAGE_peak_1_at_uc003bgl.1_5end | ||
|id=chr22:46001308..46001315,- | |id=chr22:46001308..46001315,- | ||
|ontology_enrichment_celltype=CL:0002188;6.78e-08;5 | |ontology_enrichment_celltype=CL:0000066!1.70e-19!254 | ||
| | |ontology_enrichment_celltype_v019=CL:0002188;6.78e-08;5 | ||
| | |ontology_enrichment_celltype_v019_2=CL:0002188,6.55e-08,5 | ||
|ontology_enrichment_uberon=UBERON:0001737;1.31e-15;9!UBERON:0001557;1.31e-15;9!UBERON:0000014;1.50e-09;4 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease_v019=DOID:3151;5.97e-34;1!DOID:3149;5.97e-34;1!DOID:4468;5.48e-18;2!DOID:3451;9.86e-18;2!DOID:4159;9.86e-18;2!DOID:0060122;9.86e-18;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,9.85e-34,1;DOID:3149,9.85e-34,1;DOID:4468,5.48e-18,2;DOID:3451,1.27e-17,2;DOID:4159,1.27e-17,2;DOID:0060122,1.27e-17,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.58e-39!9;UBERON:0001557!1.19e-17!19;UBERON:0002394!4.25e-17!4;UBERON:0003928!4.25e-17!4;UBERON:0008947!1.26e-16!38;UBERON:0003258!1.26e-16!38;UBERON:0000072!3.14e-13!46;UBERON:0000077!9.59e-12!130;UBERON:0004921!9.59e-12!129;UBERON:0004185!9.59e-12!129;UBERON:0001041!2.75e-11!98;UBERON:0000065!4.18e-11!53;UBERON:0001007!5.76e-11!155;UBERON:0001555!5.76e-11!155;UBERON:0007026!5.76e-11!155;UBERON:0002294!8.12e-10!7;UBERON:0001173!8.12e-10!7;UBERON:0004912!8.12e-10!7;UBERON:0004119!1.35e-09!169;UBERON:0000925!1.35e-09!169;UBERON:0006595!1.35e-09!169;UBERON:0000058!2.55e-09!26;UBERON:0001004!1.06e-08!72;UBERON:0003104!2.67e-08!238;UBERON:0009142!2.67e-08!238;UBERON:0001048!5.25e-08!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.31e-15;9!UBERON:0001557;1.31e-15;9!UBERON:0000014;1.50e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.22e-15,9;UBERON:0000014,1.70e-09,4;UBERON:0001557,6.15e-08,19 | |||
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| ||
|short_description=p1@ENST00000422971,p1@uc003bgl.1 | |short_description=p1@ENST00000422971,p1@uc003bgl.1 | ||
}} | }} |
Latest revision as of 22:05, 28 July 2015
Short description: | p1@ENST00000422971, p1@uc003bgl.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000422971_5end, CAGE_peak_1_at_uc003bgl.1_5end |
Coexpression cluster: | NA |
Association with transcript: | 185bp_to_ENST00000422971, uc003bgl.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 6.55e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.22e-15 | 9 |
zone of skin | 1.70e-09 | 4 |
upper respiratory tract | 6.15e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 9.85e-34 | 1 |
keratoacanthoma | 9.85e-34 | 1 |
clear cell adenocarcinoma | 5.48e-18 | 2 |
skin carcinoma | 1.27e-17 | 2 |
skin cancer | 1.27e-17 | 2 |
integumentary system cancer | 1.27e-17 | 2 |