FFCP PHASE1:Hg19::chr2:120973979..120973999,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=120bp_to_ENST00000455707_5end | |association_with_transcript=120bp_to_ENST00000455707_5end | ||
|cluster_id=chr2:120973979..120973999,- | |||
|description=CAGE_peak_2_at_ENST00000455707_5end | |description=CAGE_peak_2_at_ENST00000455707_5end | ||
|id=chr2:120973979..120973999,- | |id=chr2:120973979..120973999,- | ||
|ontology_enrichment_celltype=CL:0000039!5.87e-23!7;CL:0000586!5.87e-23!7;CL:0002322!1.54e-21!5;CL:0000083!1.19e-10!4;CL:1000415!2.22e-10!2;CL:0000066!2.87e-10!254;CL:0002251!2.30e-07!21;CL:0002178!3.08e-07!3 | |ontology_enrichment_celltype=CL:0000039!5.87e-23!7;CL:0000586!5.87e-23!7;CL:0002322!1.54e-21!5;CL:0000083!1.19e-10!4;CL:1000415!2.22e-10!2;CL:0000066!2.87e-10!254;CL:0002251!2.30e-07!21;CL:0002178!3.08e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.01e-19;7!CL:0000586;1.01e-19;7!CL:0002553;3.88e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.12e-19,7;CL:0000586,1.12e-19,7;CL:0002553,4.06e-10,1;CL:0000066,2.72e-09,253 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.76e-08;10!UBERON:0005564;2.76e-08;10 | |||
|ontology_enrichment_disease=DOID:305!2.02e-21!106;DOID:0050687!2.90e-17!143;DOID:162!8.15e-13!235;DOID:14566!2.12e-12!239;DOID:1793!1.19e-10!4;DOID:3493!3.36e-10!2;DOID:3095!3.00e-09!22;DOID:2994!3.00e-09!22;DOID:1749!2.49e-08!14;DOID:3119!4.21e-08!14;DOID:299!4.81e-08!25;DOID:170!3.03e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.43e-15;14!DOID:305;6.46e-11;106!DOID:1799;1.98e-10;1!DOID:10165;1.98e-10;1!DOID:1798;1.98e-10;1!DOID:3151;6.05e-10;1!DOID:3149;6.05e-10;1!DOID:3095;1.49e-09;22!DOID:2994;1.49e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.50e-26,106;DOID:0050687,3.90e-21,143;DOID:162,3.33e-16,235;DOID:14566,8.48e-16,239;DOID:1749,1.30e-15,14;DOID:1799,2.37e-10,1;DOID:10165,2.37e-10,1;DOID:1798,2.37e-10,1;DOID:3151,6.91e-10,1;DOID:3149,6.91e-10,1;DOID:3095,1.53e-09,22;DOID:2994,1.53e-09,22 | |||
|ontology_enrichment_uberon=UBERON:0002294!7.79e-11!7;UBERON:0001173!7.79e-11!7;UBERON:0004912!7.79e-11!7;UBERON:0000473!2.31e-09!8;UBERON:0002110!3.48e-07!3;UBERON:0006242!3.48e-07!3;UBERON:0003135!8.08e-07!11;UBERON:0005409!8.45e-07!35 | |ontology_enrichment_uberon=UBERON:0002294!7.79e-11!7;UBERON:0001173!7.79e-11!7;UBERON:0004912!7.79e-11!7;UBERON:0000473!2.31e-09!8;UBERON:0002110!3.48e-07!3;UBERON:0006242!3.48e-07!3;UBERON:0003135!8.08e-07!11;UBERON:0005409!8.45e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0002294;9.43e-12;7!UBERON:0001173;9.43e-12;7!UBERON:0000473;3.13e-10;8!UBERON:0000997;3.88e-10;1!UBERON:0005056;3.88e-10;1!UBERON:0004176;3.88e-10;1!UBERON:0003343;7.08e-10;4!UBERON:0004785;7.08e-10;4!UBERON:0002394;1.89e-09;4!UBERON:0003928;1.89e-09;4!UBERON:0003135;1.42e-07;11!UBERON:0000974;7.36e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.28e-10,8;UBERON:0000997,4.44e-10,1;UBERON:0005056,4.44e-10,1;UBERON:0003343,6.63e-10,4;UBERON:0004785,6.63e-10,4;UBERON:0002294,3.13e-09,9;UBERON:0001173,3.13e-09,9;UBERON:0004912,3.13e-09,9;UBERON:0003135,1.46e-07,11 | |||
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|short_description=p2@ENST00000455707 | |short_description=p2@ENST00000455707 | ||
}} | }} |
Latest revision as of 23:55, 28 July 2015
Short description: | p2@ENST00000455707 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000455707_5end |
Coexpression cluster: | NA |
Association with transcript: | 120bp_to_ENST00000455707_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.12e-19 | 7 |
germ cell | 1.12e-19 | 7 |
lung fibroblast | 4.06e-10 | 1 |
epithelial cell | 2.72e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
testis | 3.28e-10 | 8 |
mammalian vulva | 4.44e-10 | 1 |
external female genitalia | 4.44e-10 | 1 |
mucosa of oral region | 6.63e-10 | 4 |
respiratory system mucosa | 6.63e-10 | 4 |
biliary system | 3.13e-09 | 9 |
biliary tree | 3.13e-09 | 9 |
biliary bud | 3.13e-09 | 9 |
male reproductive organ | 1.46e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.50e-26 | 106 |
cell type cancer | 3.90e-21 | 143 |
cancer | 3.33e-16 | 235 |
disease of cellular proliferation | 8.48e-16 | 239 |
squamous cell carcinoma | 1.30e-15 | 14 |
islet cell tumor | 2.37e-10 | 1 |
endocrine pancreas cancer | 2.37e-10 | 1 |
pancreatic endocrine carcinoma | 2.37e-10 | 1 |
skin squamous cell carcinoma | 6.91e-10 | 1 |
keratoacanthoma | 6.91e-10 | 1 |
germ cell and embryonal cancer | 1.53e-09 | 22 |
germ cell cancer | 1.53e-09 | 22 |