FFCP PHASE1:Hg19::chr2:177021851..177021861,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:177021851..177021861,+ | |||
|coexpression_cluster_id=C85 | |||
|description=CAGE_peak_at_chr2:177021851..177021861,+ | |description=CAGE_peak_at_chr2:177021851..177021861,+ | ||
|id=chr2:177021851..177021861,+ | |id=chr2:177021851..177021861,+ | ||
|ontology_enrichment_celltype=CL:0000167!2.82e-07!1;CL:0000164!2.82e-07!1;CL:0000502!2.82e-07!1;CL:0000172!2.82e-07!1;CL:0000173!2.82e-07!1;CL:0002351!2.82e-07!1;CL:1001319!4.01e-07!1;CL:1000600!4.01e-07!1 | |ontology_enrichment_celltype=CL:0000167!2.82e-07!1;CL:0000164!2.82e-07!1;CL:0000502!2.82e-07!1;CL:0000172!2.82e-07!1;CL:0000173!2.82e-07!1;CL:0002351!2.82e-07!1;CL:1001319!4.01e-07!1;CL:1000600!4.01e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000167;5.05e-34;1!CL:0000164;5.05e-34;1!CL:0000502;5.05e-34;1!CL:0000172;5.05e-34;1!CL:0000173;5.05e-34;1!CL:0000333;2.08e-27;5!CL:0000123;9.07e-18;2!CL:0002535;9.07e-18;2!CL:0000242;9.07e-18;2!CL:0002321;7.41e-10;15!CL:0000312;6.55e-08;5!CL:0000240;8.48e-07;6!CL:0000311;8.48e-07;6!CL:0000079;8.48e-07;6!CL:0000237;8.48e-07;6!CL:0002543;8.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,9.85e-34,1;CL:0000164,9.85e-34,1;CL:0000502,9.85e-34,1;CL:0000172,9.85e-34,1;CL:0000173,9.85e-34,1;CL:0002351,9.85e-34,1;CL:0002535,7.67e-18,2;CL:0000242,1.07e-17,2;CL:0000312,7.01e-08,5;CL:0000333,1.11e-07,41;CL:0002543,8.48e-07,6;CL:0000240,8.97e-07,6;CL:0000311,8.97e-07,6;CL:0000079,8.97e-07,6;CL:0000237,8.97e-07,6;CL:0000036,8.97e-07,6;CL:0000357,8.97e-07,6;CL:0000114,8.97e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002351;5.05e-34;1!CL:0000357;8.48e-07;6!CL:0000114;8.48e-07;6 | |||
|ontology_enrichment_disease=DOID:169!1.43e-09!6;DOID:4430!2.82e-07!1 | |ontology_enrichment_disease=DOID:169!1.43e-09!6;DOID:4430!2.82e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:169;6.35e-50;6!DOID:4430;5.05e-34;1!DOID:171;2.27e-30;10!DOID:3095;2.73e-14;22!DOID:2994;2.73e-14;22!DOID:4362;6.55e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:169,6.35e-50,6;DOID:4430,9.85e-34,1;DOID:171,2.27e-30,10;DOID:3095,2.73e-14,22;DOID:2994,2.73e-14,22;DOID:4362,6.13e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0002298!2.78e-11!8;UBERON:0003076!4.30e-09!15;UBERON:0003057!4.30e-09!15;UBERON:0000988!2.16e-08!3;UBERON:0001896!2.80e-08!3;UBERON:0005290!2.80e-08!3;UBERON:0010096!2.80e-08!3;UBERON:0004733!1.48e-07!12;UBERON:0002028!1.48e-07!12;UBERON:0007277!1.48e-07!12;UBERON:0004645!4.01e-07!1;UBERON:0001256!4.01e-07!1;UBERON:0001259!4.01e-07!1;UBERON:0004732!5.58e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;2.08e-27;5!UBERON:0002410;2.08e-27;5!UBERON:0006955;9.07e-18;2!UBERON:0004801;9.07e-18;2!UBERON:0000010;9.73e-16;8!UBERON:0000002;8.48e-07;6!UBERON:0001560;8.48e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.59e-27,5;UBERON:0002410,1.59e-27,5;UBERON:0006955,7.67e-18,2;UBERON:0004801,7.67e-18,2;UBERON:0000010,8.39e-16,8;UBERON:0000002,8.02e-07,6;UBERON:0001560,8.02e-07,6 | |||
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|short_description=p@chr2:177021851..177021861,+ | |short_description=p@chr2:177021851..177021861,+ | ||
}} | }} |
Latest revision as of 02:48, 29 July 2015
Short description: | p@chr2:177021851..177021861, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:177021851..177021861, + |
Coexpression cluster: | C85_neuroblastoma_carcinoid_retinoblastoma_small_pineal_rhabdomyosarcoma_medulloblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 9.85e-34 | 1 |
enteroendocrine cell | 9.85e-34 | 1 |
type D enteroendocrine cell | 9.85e-34 | 1 |
somatostatin secreting cell | 9.85e-34 | 1 |
pancreatic D cell | 9.85e-34 | 1 |
progenitor cell of endocrine pancreas | 9.85e-34 | 1 |
epithelial cell of cervix | 7.67e-18 | 2 |
Merkel cell | 1.07e-17 | 2 |
keratinocyte | 7.01e-08 | 5 |
migratory neural crest cell | 1.11e-07 | 41 |
vein endothelial cell | 8.48e-07 | 6 |
stratified squamous epithelial cell | 8.97e-07 | 6 |
keratin accumulating cell | 8.97e-07 | 6 |
stratified epithelial cell | 8.97e-07 | 6 |
keratinizing barrier epithelial cell | 8.97e-07 | 6 |
epithelial fate stem cell | 8.97e-07 | 6 |
stratified epithelial stem cell | 8.97e-07 | 6 |
surface ectodermal cell | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.59e-27 | 5 |
autonomic nervous system | 1.59e-27 | 5 |
uterine epithelium | 7.67e-18 | 2 |
cervix epithelium | 7.67e-18 | 2 |
peripheral nervous system | 8.39e-16 | 8 |
uterine cervix | 8.02e-07 | 6 |
neck of organ | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 6.35e-50 | 6 |
somatostatinoma | 9.85e-34 | 1 |
neuroectodermal tumor | 2.27e-30 | 10 |
germ cell and embryonal cancer | 2.73e-14 | 22 |
germ cell cancer | 2.73e-14 | 22 |
cervical cancer | 6.13e-08 | 5 |