FFCP PHASE1:Hg19::chr2:18116344..18116353,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP
|id=chr2:18116344..18116353,+
|short_description=p@chr2:18116344..18116353,+
|description=CAGE_peak_at_chr2:18116344..18116353,+
|association_with_transcript=NA
|E...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:18116344..18116353,+ | |||
|coexpression_cluster_id=C230 | |||
|description=CAGE_peak_at_chr2:18116344..18116353,+ | |||
|id=chr2:18116344..18116353,+ | |||
|ontology_enrichment_celltype=CL:0000864!6.65e-14!1;CL:0000091!6.65e-14!1;CL:0002594!1.95e-13!4;CL:0002589!1.28e-07!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;4.67e-66;4!UBERON:0007284;4.67e-66;4!UBERON:0006965;3.61e-34;2!UBERON:0004872;8.16e-11;7!UBERON:0003104;2.91e-09;31 | |||
|ontology_enrichment_disease=DOID:3571!6.65e-14!1;DOID:3350!1.36e-07!2;DOID:4929!2.12e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003978!5.05e-18!3;UBERON:0009751!5.05e-18!3;UBERON:0000946!5.05e-18!3;UBERON:0002523!5.05e-18!3;UBERON:0005983!5.05e-18!3;UBERON:0002165!5.05e-18!3;UBERON:0002062!5.05e-18!3;UBERON:0007280!5.05e-18!3;UBERON:0001981!5.35e-16!60;UBERON:0007500!5.35e-16!60;UBERON:0004537!5.35e-16!60;UBERON:0006965!5.35e-16!60;UBERON:0002135!3.50e-14!1;UBERON:0002146!3.98e-14!1;UBERON:0005623!3.98e-14!1;UBERON:0000055!8.82e-14!69;UBERON:0004872!9.75e-14!84;UBERON:0004913!1.61e-13!1;UBERON:0003703!1.61e-13!1;UBERON:0001174!1.61e-13!1;UBERON:0004914!1.61e-13!1;UBERON:0001310!1.95e-13!4;UBERON:0002049!6.60e-12!79;UBERON:0007798!6.60e-12!79;UBERON:0003914!1.82e-11!118;UBERON:0004535!3.35e-10!110;UBERON:0001009!6.75e-10!113;UBERON:0002133!9.87e-08!2;UBERON:0000025!1.10e-07!194;UBERON:0000341!1.20e-07!2;UBERON:0001529!1.28e-07!2;UBERON:0007204!1.28e-07!2;UBERON:0001637!1.88e-07!42;UBERON:0003509!1.88e-07!42;UBERON:0004572!1.88e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;1.52e-87;3!UBERON:0000946;1.52e-87;3!UBERON:0002135;3.34e-66;1!UBERON:0002146;3.34e-66;1!UBERON:0005623;3.34e-66;1!UBERON:0002133;5.96e-34;2!UBERON:0010313;2.72e-27;10!UBERON:0000948;4.26e-13;22!UBERON:0007100;1.15e-11;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.52e-87,3;UBERON:0009751,1.52e-87,3;UBERON:0000946,1.52e-87,3;UBERON:0002523,1.52e-87,3;UBERON:0005983,1.52e-87,3;UBERON:0002165,1.52e-87,3;UBERON:0002062,1.52e-87,3;UBERON:0007280,1.52e-87,3;UBERON:0002135,2.39e-66,1;UBERON:0002146,4.66e-66,1;UBERON:0005623,4.66e-66,1;UBERON:0004797,2.18e-38,7;UBERON:0002133,5.04e-34,2;UBERON:0010313,2.72e-27,10;UBERON:0002342,2.72e-27,10;UBERON:0005062,2.72e-27,10;UBERON:0000948,4.20e-12,24;UBERON:0005498,4.20e-12,24;UBERON:0004140,4.20e-12,24;UBERON:0009881,4.20e-12,24;UBERON:0004141,4.20e-12,24;UBERON:0003084,4.20e-12,24;UBERON:0007005,4.20e-12,24;UBERON:0004139,4.20e-12,24;UBERON:0004291,4.20e-12,24;UBERON:0007500,3.99e-11,59;UBERON:0001981,3.99e-11,59;UBERON:0004537,3.99e-11,59;UBERON:0006965,3.99e-11,59;UBERON:0007100,6.90e-11,27;UBERON:0000055,8.58e-10,68;UBERON:0002049,1.14e-08,78;UBERON:0007798,1.14e-08,78;UBERON:0004872,3.31e-08,83 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.38345574152353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67569440763353,1.14580212005842,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.38345574152353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67569440763353,1.14580212005842,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr2:18116344..18116353,+ | |||
}} | }} |
Latest revision as of 03:55, 29 July 2015
Short description: | p@chr2:18116344..18116353, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:18116344..18116353, + |
Coexpression cluster: | C230_aorta_normal_heart_penis_osteosarcoma_basal_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p@chr2:18116344..18116353+ |
---|
0.0
1.0
2.0
3.0
4.0
5.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
valve | 1.52e-87 | 3 |
cardiac mesenchyme | 1.52e-87 | 3 |
cardial valve | 1.52e-87 | 3 |
tunica intima | 1.52e-87 | 3 |
heart layer | 1.52e-87 | 3 |
endocardium | 1.52e-87 | 3 |
endocardial cushion | 1.52e-87 | 3 |
presumptive endocardium | 1.52e-87 | 3 |
mitral valve | 2.39e-66 | 1 |
pulmonary valve | 4.66e-66 | 1 |
Showing 1 to 10 of 34 entries