FFCP PHASE1:Hg19::chr2:208104351..208104375,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000440326_5end | |association_with_transcript=0bp_to_ENST00000440326_5end | ||
|cluster_id=chr2:208104351..208104375,+ | |||
|coexpression_cluster_id=C1890 | |||
|description=CAGE_peak_1_at_ENST00000440326_5end | |description=CAGE_peak_1_at_ENST00000440326_5end | ||
|id=chr2:208104351..208104375,+ | |id=chr2:208104351..208104375,+ | ||
|ontology_enrichment_celltype=CL:0000548!4.31e-22!679;CL:0000004!4.31e-22!679;CL:0000255!4.31e-22!679;CL:0000012!1.70e-21!682;CL:0000144!5.34e-19!625;CL:0002371!3.79e-17!591;CL:0000055!2.16e-15!180;CL:0000003!4.74e-15!722;CL:0000220!1.03e-14!246;CL:0002321!2.99e-14!248;CL:0000057!4.09e-10!75;CL:0000680!6.73e-09!57;CL:0000056!6.73e-09!57;CL:0000355!6.73e-09!57;CL:0000063!1.42e-08!578;CL:0002368!3.42e-08!13;CL:0000187!9.74e-08!54;CL:0002076!1.30e-07!43;CL:0002159!4.40e-07!13;CL:0000183!4.74e-07!59 | |ontology_enrichment_celltype=CL:0000548!4.31e-22!679;CL:0000004!4.31e-22!679;CL:0000255!4.31e-22!679;CL:0000012!1.70e-21!682;CL:0000144!5.34e-19!625;CL:0002371!3.79e-17!591;CL:0000055!2.16e-15!180;CL:0000003!4.74e-15!722;CL:0000220!1.03e-14!246;CL:0002321!2.99e-14!248;CL:0000057!4.09e-10!75;CL:0000680!6.73e-09!57;CL:0000056!6.73e-09!57;CL:0000355!6.73e-09!57;CL:0000063!1.42e-08!578;CL:0002368!3.42e-08!13;CL:0000187!9.74e-08!54;CL:0002076!1.30e-07!43;CL:0002159!4.40e-07!13;CL:0000183!4.74e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002368;9.46e-12;13!CL:0002076;3.45e-11;42!CL:0002159;3.60e-09;14!CL:0002251;2.09e-07;20!CL:0000154;3.41e-07;6!CL:0002202;3.99e-07;9!CL:0002632;3.99e-07;9!CL:0000244;8.46e-07;4!CL:0000731;8.46e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.92e-14,42;CL:0002321,3.20e-12,250;CL:0002368,5.48e-12,13;CL:0000223,5.21e-10,58;CL:0000066,6.25e-10,253;CL:0002159,3.97e-09,14;CL:0000076,1.32e-08,63;CL:0002202,2.78e-07,9;CL:0002632,2.78e-07,9;CL:0002251,2.82e-07,20;CL:0002077,2.89e-07,34;CL:0000154,3.70e-07,6;CL:0000244,8.41e-07,4;CL:0000731,8.41e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.60e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.55e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.88e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0000486!1.16e-12!82;UBERON:0003102!2.52e-11!95;UBERON:0000914!1.04e-10!83;UBERON:0002329!1.04e-10!83;UBERON:0003077!1.04e-10!83;UBERON:0003059!1.04e-10!83;UBERON:0007282!1.04e-10!83;UBERON:0009618!1.04e-10!83;UBERON:0007285!1.04e-10!83;UBERON:0004290!3.79e-09!70;UBERON:0002199!5.33e-08!45;UBERON:0002416!5.33e-08!45;UBERON:0001134!1.90e-07!61;UBERON:0002036!1.90e-07!61;UBERON:0003082!1.90e-07!61;UBERON:0000475!2.63e-07!365;UBERON:0002097!3.53e-07!40;UBERON:0005256!3.80e-07!143;UBERON:0002385!8.19e-07!63;UBERON:0001015!8.19e-07!63;UBERON:0000383!8.19e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;3.66e-08;5!UBERON:0010371;9.13e-08;31!UBERON:0000486;2.74e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.24e-09,99;UBERON:0000033,2.76e-08,56;UBERON:0000365,3.73e-08,5;UBERON:0000153,8.02e-07,62;UBERON:0007811,8.02e-07,62 | |||
|phase1_expression=3.63356758541113,3.8538094300377,3.38290569830331,3.00219895059391,0.893922188854576,0.872338524100369,0,3.79031924056099,0.261185628199839,1.96587149201207,1.39560233594486,0,0.527533956456907,1.23766352960047,0.662794751455832,0.672325146451775,0.602694528023977,0.730310090387373,0,1.10808952269109,0.408001382488506,0,0.85870796139317,0.684372125364421,0.87879847716362,0,0,0,0,0,0.154816123316076,2.75826367343678,5.4217065380085,10.7228662948368,0,0,0,0,0,0,0,0,0,0.145398238779565,0.755751887377619,0.242584061187816,0.232429036905685,0,0.929119112685311,0.575384784644301,0,0.945928919554341,0.344745680736619,0.645484683583826,0,0,0.272906150057846,0.449446968890169,0.918251677112708,0.320929027076094,0,0,0.598390972864896,0.426224750532694,0,0,0,1.50749199154046,1.0429658368404,0.434377689410233,0,0,0.316462387440884,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0.361439152384566,0.50133791063589,0.289693037921647,0,0,1.22895262313288,1.99556457716308,1.05401742831751,0,5.46442932438813,5.93255108455087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.23312862571041,0.993943903390637,0.759783069987479,2.1185468930115,0.286836620748814,0.354668382198357,0,0,0.98667019366864,0.622422070799533,0.67355336034844,0.980771418680752,0,0,0,0.936480230490962,1.1409436430889,0.298897361103602,0.822041490506354,1.45685649931318,0.98315564691574,0.61246251376468,0.368502951935304,0.413303124703062,0,0.247266929278557,7.28129089550421,2.15585442544872,0.505008341862199,0.250237039743928,1.38532057742091,0,1.5324389789951,0,2.1552114800404,0.717558542755448,0.640672166455702,1.05965950579781,0.900273288253207,1.23663035086127,0.257640540045629,0.558350568994769,1.0126579934476,0.974370051611986,0,1.10459878370759,0.323292113637624,0,1.5112814734146,1.01736355386293,7.73043412653187,10.3643525824517,8.60413786167011,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,0.928735856063958,0,0.473227200159376,0.674338760312407,0.482022059766964,0.330881918197182,0.217879444092406,0,0.134831308160164,0.392442930250692,0.38474715694639,0,4.20725321410337,0.8231480226628,0,0,0,0,0,0,6.00487336044839,12.1822816803574,3.37205259772859,9.24866546187004,5.64789515467031,0,1.03993478527958,1.44331342025273,0,2.11335649624479,0.144366447761074,0,0,0,0,0,0,0,7.49870671894216,9.57498130733499,9.07360622351273,15.3145073821871,6.97521452433509,6.13412286664338,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,3.1396703616701,2.1798003441664,3.30022286194275,1.03417372606222,3.57656445851882,10.143633030672,0.26593811658487,0,1.02882949704857,0,1.8649552531127,0.142977993658148,0,2.46972101034231,17.5897539518617,0.355391948742546,0.791951872933429,3.91871190177462,4.35766729300147,1.79951384127703,0,0,0,0.718874566474748,0,0,3.76431397335706,1.2328579353023,1.79060963239896,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0.613457458595699,0,1.08506009479894,2.07970861530807,0.892144943985809,0.630809660135739,0.819989904948992,0,0,0,0,0.368738337083406,0.347534457872331,0.195801157462741,0,0,0,0.106727557803444,0,0,0.604780586659361,0.992431231275107,1.38115775959256,1.40330047216537,0.896974044789907,3.07024349440022,1.60853921143608,2.96836132889982,1.23367755042124,1.24293207719189,0.574890092096664,0.519254429183621,0.116210378459959,0,5.41367469818869,3.86740153530765,0.459257792658427,0.728364672026868,0,0,0.15403067420883,0,0,0.316654886678627,0,0,1.51141141271498,0,1.08378575017541,0,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,0,0,0,0.27470839445503,0.082509499920588,12.0595762979196,3.25030123018261,1.6068392984416,0.193341436584244,2.61882649094895,2.45605879561807,3.85942402956686,6.76747542670124,0.580066775656914,2.72725207731523,0.534192213880424,9.0906703448538,4.80475168412765,13.9097856619097,3.94515345336645,0.464845549297286,1.5740617341532,0.6970372701606,1.23213432070436,0,1.73986598415015,0.37064843820784,0.858749320451947,0,0.949138274156178,1.71567174531442,0.767693373934002,0.42793898803392,0.318203247925937,0.78494864019923,1.61885211824983,1.92175920815238,0.942499218765491,0.606547444719948,0,0.421258456238981,0.48763373908959,0.731140468893853,0,0.136499911407986,0.424216295861138,0,1.10273068709225,0.66343897524122,0,0.578775534266688,0.655894752046633,0.405820753925408,1.239293992399,1.69017361519345,0.286822704408103,0.88424136911809,0.35667105148125,0,0.211107635297664,0,0.379473173765715,0,11.5466535270614,11.3951386841084,6.53345909167936,0.0941438007767792,11.6236450621232,8.42357378338128,6.65145230305014,8.04031900724358,0,0.764637207142375,0,0.238231775457789,0,0,0,0,0,0,1.71528151186722,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0.343505344755765,0,0,0,0.390776190804081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,1.94310496754094,0,2.79935628895627,0.179736702294654,0,0,0,0,3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| ||
|short_description=p1@ENST00000440326 | |short_description=p1@ENST00000440326 | ||
}} | }} |
Latest revision as of 05:28, 29 July 2015
Short description: | p1@ENST00000440326 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000440326_5end |
Coexpression cluster: | C1890_Small_nasal_Mammary_Urothelial_Keratinocyte_squamous_oral |
Association with transcript: | 0bp_to_ENST00000440326_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.92e-14 | 42 |
embryonic cell | 3.20e-12 | 250 |
respiratory epithelial cell | 5.48e-12 | 13 |
endodermal cell | 5.21e-10 | 58 |
epithelial cell | 6.25e-10 | 253 |
general ecto-epithelial cell | 3.97e-09 | 14 |
squamous epithelial cell | 1.32e-08 | 63 |
epithelial cell of tracheobronchial tree | 2.78e-07 | 9 |
epithelial cell of lower respiratory tract | 2.78e-07 | 9 |
epithelial cell of alimentary canal | 2.82e-07 | 20 |
ecto-epithelial cell | 2.89e-07 | 34 |
protein secreting cell | 3.70e-07 | 6 |
transitional epithelial cell | 8.41e-07 | 4 |
urothelial cell | 8.41e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.24e-09 | 99 |
head | 2.76e-08 | 56 |
urothelium | 3.73e-08 | 5 |
anterior region of body | 8.02e-07 | 62 |
craniocervical region | 8.02e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.88e-11 | 14 |