FFCP PHASE1:Hg19::chr2:210798666..210798677,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:210798666..210798677,+ | |||
|coexpression_cluster_id=C1022 | |||
|description=CAGE_peak_at_chr2:210798666..210798677,+ | |description=CAGE_peak_at_chr2:210798666..210798677,+ | ||
|id=chr2:210798666..210798677,+ | |id=chr2:210798666..210798677,+ | ||
|ontology_enrichment_celltype=CL:0000064!4.49e-19!3;CL:0005012!4.49e-19!3;CL:0000067!4.49e-19!3;CL:0002304!4.49e-19!3;CL:0002319!5.56e-13!25;CL:0000047!2.27e-12!8;CL:0000221!4.12e-11!71;CL:0000133!8.26e-10!59;CL:0000342!1.98e-07!1;CL:0002565!1.98e-07!1 | |ontology_enrichment_celltype=CL:0000064!4.49e-19!3;CL:0005012!4.49e-19!3;CL:0000067!4.49e-19!3;CL:0002304!4.49e-19!3;CL:0002319!5.56e-13!25;CL:0000047!2.27e-12!8;CL:0000221!4.12e-11!71;CL:0000133!8.26e-10!59;CL:0000342!1.98e-07!1;CL:0002565!1.98e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000064;7.79e-88;3!CL:0000067;7.79e-88;3!CL:0005012;7.79e-88;3!CL:0002304;7.79e-88;3!CL:0000047;5.96e-34;2!CL:0000710;2.49e-14;20!CL:0000075;6.40e-11;27!CL:0002077;2.74e-09;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,6.24e-88,3;CL:0000067,6.24e-88,3;CL:0005012,6.24e-88,3;CL:0002304,6.24e-88,3;CL:0000710,2.41e-14,20;CL:0000075,6.25e-11,27;CL:0000133,8.52e-11,59;CL:0000047,1.47e-09,8;CL:0000221,4.40e-09,72;CL:0002077,6.54e-09,34 | |||
|ontology_enrichment_development_v019=CL:0000133;7.69e-09;59 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr2:210798666..210798677,+ | |short_description=p@chr2:210798666..210798677,+ | ||
}} | }} |
Latest revision as of 05:41, 29 July 2015
Short description: | p@chr2:210798666..210798677, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:210798666..210798677, + |
Coexpression cluster: | C1022_Ciliary_Lens_Astrocyte_Neural_Iris_retina_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 6.24e-88 | 3 |
ciliated epithelial cell | 6.24e-88 | 3 |
multi-ciliated epithelial cell | 6.24e-88 | 3 |
non-pigmented ciliary epithelial cell | 6.24e-88 | 3 |
neurecto-epithelial cell | 2.41e-14 | 20 |
columnar/cuboidal epithelial cell | 6.25e-11 | 27 |
neurectodermal cell | 8.52e-11 | 59 |
neuronal stem cell | 1.47e-09 | 8 |
ectodermal cell | 4.40e-09 | 72 |
ecto-epithelial cell | 6.54e-09 | 34 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 6.24e-88 | 3 |
ciliary body | 6.24e-88 | 3 |
atypical epithelium | 2.40e-66 | 4 |
vasculature of eye | 9.76e-45 | 6 |
uvea | 9.76e-45 | 6 |
vasculature of head | 9.76e-45 | 6 |
pigment epithelium of eye | 4.86e-25 | 11 |
vasculature of organ | 4.86e-25 | 11 |
anterior segment of eyeball | 5.89e-20 | 14 |
camera-type eye | 2.41e-14 | 20 |
simple eye | 2.41e-14 | 20 |
immature eye | 2.41e-14 | 20 |
ocular region | 2.41e-14 | 20 |
eyeball of camera-type eye | 2.41e-14 | 20 |
optic cup | 2.41e-14 | 20 |
optic vesicle | 2.41e-14 | 20 |
eye primordium | 2.41e-14 | 20 |
eye | 1.02e-13 | 21 |
visual system | 1.02e-13 | 21 |
face | 3.77e-13 | 22 |
sense organ | 3.75e-12 | 24 |
sensory system | 3.75e-12 | 24 |
entire sense organ system | 3.75e-12 | 24 |
ectodermal placode | 1.15e-09 | 31 |