FFCP PHASE1:Hg19::chr2:25585766..25585790,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:25585766..25585790,+ | |||
|coexpression_cluster_id=C342 | |coexpression_cluster_id=C342 | ||
|description=CAGE_peak_at_chr2:25585766..25585790,+ | |description=CAGE_peak_at_chr2:25585766..25585790,+ | ||
|id=chr2:25585766..25585790,+ | |id=chr2:25585766..25585790,+ | ||
|ontology_enrichment_celltype=CL:0000945!5.73e-33!24;CL:0000826!5.73e-33!24;CL:0000542!1.86e-22!53;CL:0000051!1.86e-22!53;CL:0000838!2.63e-20!52;CL:0000738!2.44e-17!140;CL:0000988!1.45e-16!182;CL:0002031!1.33e-15!124;CL:0000037!2.32e-15!172;CL:0000566!2.32e-15!172;CL:0002087!4.53e-15!119;CL:0002032!5.83e-15!165;CL:0000837!5.83e-15!165;CL:0000236!1.47e-14!14;CL:0000785!1.45e-09!2;CL:0000955!1.45e-09!2;CL:0000818!1.45e-09!2;CL:0000954!1.45e-09!2;CL:0000816!1.45e-09!2 | |ontology_enrichment_celltype=CL:0000945!5.73e-33!24;CL:0000826!5.73e-33!24;CL:0000542!1.86e-22!53;CL:0000051!1.86e-22!53;CL:0000838!2.63e-20!52;CL:0000738!2.44e-17!140;CL:0000988!1.45e-16!182;CL:0002031!1.33e-15!124;CL:0000037!2.32e-15!172;CL:0000566!2.32e-15!172;CL:0002087!4.53e-15!119;CL:0002032!5.83e-15!165;CL:0000837!5.83e-15!165;CL:0000236!1.47e-14!14;CL:0000785!1.45e-09!2;CL:0000955!1.45e-09!2;CL:0000818!1.45e-09!2;CL:0000954!1.45e-09!2;CL:0000816!1.45e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.63e-23;24!CL:0000542;1.92e-10;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.80e-23,24;CL:0000826,3.80e-23,24;CL:0000838,2.69e-15,52;CL:0000542,5.21e-15,53;CL:0000051,5.21e-15,53;CL:0002087,3.47e-09,115;CL:0002031,8.49e-09,120;CL:0000738,9.62e-08,136 | |||
|ontology_enrichment_development_v019=CL:0000051;1.92e-10;53 | |||
|ontology_enrichment_disease=DOID:0060058!2.05e-10!10;DOID:74!9.90e-09!2 | |ontology_enrichment_disease=DOID:0060058!2.05e-10!10;DOID:74!9.90e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:630;1.07e-23;1!DOID:0050177;1.07e-23;1!DOID:0050427;1.07e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.07e-23,1;DOID:0050177,1.07e-23,1;DOID:0050427,1.07e-23,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;9.66e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,9.66e-09,3;UBERON:0004854,9.66e-09,3;UBERON:0009034,9.66e-09,3;UBERON:0002095,9.66e-09,3;UBERON:0004782,9.66e-09,3;UBERON:0003281,9.66e-09,3;UBERON:0009664,9.66e-09,3;UBERON:0002296,9.66e-09,3;UBERON:0005602,9.66e-09,3;UBERON:0001179,9.66e-09,3;UBERON:0006293,9.66e-09,3 | |||
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| ||
|short_description=p@chr2:25585766..25585790,+ | |short_description=p@chr2:25585766..25585790,+ | ||
}} | }} |
Latest revision as of 08:55, 29 July 2015
Short description: | p@chr2:25585766..25585790, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:25585766..25585790, + |
Coexpression cluster: | C342_xeroderma_b_B_splenic_plasma_Burkitt_thymus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.80e-23 | 24 |
pro-B cell | 3.80e-23 | 24 |
lymphoid lineage restricted progenitor cell | 2.69e-15 | 52 |
lymphocyte | 5.21e-15 | 53 |
common lymphoid progenitor | 5.21e-15 | 53 |
nongranular leukocyte | 3.47e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 8.49e-09 | 120 |
leukocyte | 9.62e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
spleen | 9.66e-09 | 3 |
gastrointestinal system mesentery | 9.66e-09 | 3 |
stomach region | 9.66e-09 | 3 |
mesentery | 9.66e-09 | 3 |
gastrointestinal system serosa | 9.66e-09 | 3 |
mesentery of stomach | 9.66e-09 | 3 |
gut mesentery | 9.66e-09 | 3 |
dorsal mesentery | 9.66e-09 | 3 |
dorsal mesogastrium | 9.66e-09 | 3 |
peritoneal cavity | 9.66e-09 | 3 |
spleen primordium | 9.66e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.07e-23 | 1 |
monogenic disease | 1.07e-23 | 1 |
xeroderma pigmentosum | 1.07e-23 | 1 |