FFCP PHASE1:Hg19::chr3:14658573..14658581,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:14658573..14658581,+ | |||
|coexpression_cluster_id=C232 | |||
|description=CAGE_peak_at_chr3:14658573..14658581,+ | |description=CAGE_peak_at_chr3:14658573..14658581,+ | ||
|id=chr3:14658573..14658581,+ | |id=chr3:14658573..14658581,+ | ||
|ontology_enrichment_celltype=CL:0000133!1.98e-08!59;CL:0000221!2.08e-08!71;CL:0000039!1.70e-07!7;CL:0000586!1.70e-07!7 | |ontology_enrichment_celltype=CL:0000133!1.98e-08!59;CL:0000221!2.08e-08!71;CL:0000039!1.70e-07!7;CL:0000586!1.70e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000307;2.89e-12;3!CL:0000083;1.57e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,2.89e-12,3;CL:0000069,2.89e-12,3;CL:0000307,2.89e-12,3;CL:0000377,2.89e-12,3;CL:0000083,1.44e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0008814;7.67e-18;2!UBERON:0010056;7.67e-18;2!CL:0000377;2.89e-12;3 | |||
|ontology_enrichment_disease=DOID:162!1.53e-18!235;DOID:14566!6.59e-18!239;DOID:0050687!6.60e-18!143;DOID:3095!9.54e-15!22;DOID:2994!9.54e-15!22;DOID:169!5.46e-08!6;DOID:0050686!6.62e-08!137;DOID:305!2.55e-07!106;DOID:171!3.07e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:4074;1.07e-17;2!DOID:4905;1.07e-17;2!DOID:3498;1.07e-17;2!DOID:1793;1.57e-09;4!DOID:3095;4.79e-07;22!DOID:2994;4.79e-07;22!DOID:170;8.97e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,9.07e-18,2;DOID:4905,9.07e-18,2;DOID:3498,9.07e-18,2;DOID:1793,1.44e-09,4;DOID:3095,4.79e-07,22;DOID:2994,4.79e-07,22;DOID:170,8.48e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000013!1.39e-09!5;UBERON:0002410!1.39e-09!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;2.31e-12;3!UBERON:0001033;2.31e-12;3!UBERON:0003343;1.32e-09;4!UBERON:0004785;1.32e-09;4!UBERON:0000974;8.02e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,2.31e-12,3;UBERON:0001033,2.31e-12,3;UBERON:0010056,2.31e-12,3;UBERON:0003343,1.32e-09,4;UBERON:0004785,1.32e-09,4 | |||
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| ||
|short_description=p@chr3:14658573..14658581,+ | |short_description=p@chr3:14658573..14658581,+ | ||
}} | }} |
Latest revision as of 16:41, 29 July 2015
Short description: | p@chr3:14658573..14658581, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:14658573..14658581, + |
Coexpression cluster: | C232_teratocarcinoma_HES3GFP_H9_iPS_testicular_neuroblastoma_cerebellum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 2.89e-12 | 3 |
branched duct epithelial cell | 2.89e-12 | 3 |
tracheal epithelial cell | 2.89e-12 | 3 |
tracheoblast | 2.89e-12 | 3 |
epithelial cell of pancreas | 1.44e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
tongue | 2.31e-12 | 3 |
gustatory system | 2.31e-12 | 3 |
future tongue | 2.31e-12 | 3 |
mucosa of oral region | 1.32e-09 | 4 |
respiratory system mucosa | 1.32e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 9.07e-18 | 2 |
pancreatic carcinoma | 9.07e-18 | 2 |
pancreatic ductal adenocarcinoma | 9.07e-18 | 2 |
pancreatic cancer | 1.44e-09 | 4 |
germ cell and embryonal cancer | 4.79e-07 | 22 |
germ cell cancer | 4.79e-07 | 22 |
endocrine gland cancer | 8.48e-07 | 6 |