FFCP PHASE1:Hg19::chr3:177158035..177158056,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:177158035..177158056,+ | |||
|coexpression_cluster_id=C524 | |||
|description=CAGE_peak_at_chr3:177158035..177158056,+ | |||
|id=chr3:177158035..177158056,+ | |||
|ontology_enrichment_celltype=CL:0002579!1.89e-12!3;CL:0002504!2.00e-12!3;CL:1000279!2.00e-12!3;CL:1000280!2.00e-12!3;CL:0002616!2.37e-10!1;CL:0000667!5.92e-07!6;CL:0000058!5.92e-07!6;CL:0000138!5.92e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000138;9.87e-34;6!CL:0000153;6.41e-23;9!CL:0000447;6.41e-23;9!CL:0000499;8.49e-17;28!CL:0000327;3.15e-14;15!CL:0002537;3.26e-11;5!CL:0002149;1.22e-09;6!CL:0002255;1.22e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,9.87e-34,6;CL:0000138,9.87e-34,6;CL:0000153,6.41e-23,9;CL:0000447,6.41e-23,9;CL:0000499,8.49e-17,28;CL:0000327,3.15e-14,15;CL:0002537,3.26e-11,5;CL:0002149,1.22e-09,6;CL:0002255,1.22e-09,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3001;1.22e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,1.22e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0006834!6.91e-10!1;UBERON:0004457!6.22e-07!12;UBERON:0000042!6.22e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;2.18e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,2.18e-08,7;UBERON:0004871,1.69e-07,8 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,1.00267582127178,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.0403511079691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr3:177158035..177158056,+ | |||
}} |
Latest revision as of 18:25, 29 July 2015
Short description: | p@chr3:177158035..177158056, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:177158035..177158056, + |
Coexpression cluster: | C524_serous_endometrioid_endometrial_mesothelioma_gall_clear_papillotubular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 9.87e-34 | 6 |
chondrocyte | 9.87e-34 | 6 |
GAG secreting cell | 6.41e-23 | 9 |
carbohydrate secreting cell | 6.41e-23 | 9 |
stromal cell | 8.49e-17 | 28 |
extracellular matrix secreting cell | 3.15e-14 | 15 |
amnion mesenchymal stem cell | 3.26e-11 | 5 |
epithelial cell of uterus | 1.22e-09 | 6 |
stromal cell of endometrium | 1.22e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
amnion | 2.18e-08 | 7 |
somatic layer of lateral plate mesoderm | 1.69e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 1.22e-09 | 6 |