FFCP PHASE1:Hg19::chr3:177159510..177159529,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-179bp_to_ENST00000442937_5end | |association_with_transcript=-179bp_to_ENST00000442937_5end | ||
|cluster_id=chr3:177159510..177159529,+ | |||
|description=CAGE_peak_2_at_ENST00000442937_5end | |description=CAGE_peak_2_at_ENST00000442937_5end | ||
|id=chr3:177159510..177159529,+ | |id=chr3:177159510..177159529,+ | ||
|ontology_enrichment_celltype=CL:0002615;2.91e-22;3!CL:0000197;3.60e-20;6!CL:0000098;3.60e-20;6!CL:0002167;3.60e-20;6!CL:0000138;2.66e-11;6!CL:0002579;1.83e-10;3!CL:0002622;1.83e-10;3!CL:0002504;2.87e-10;3!CL:1000279;2.87e-10;3!CL:1000280;2.87e-10;3!CL:0000710;4.71e-09;20!CL:0000136;5.21e-09;13!CL:0000153;1.08e-07;9!CL:0000447;1.08e-07;9 | |ontology_enrichment_celltype=CL:0000055!1.30e-11!180;CL:0002615!5.91e-09!3;CL:0002620!9.36e-09!23;CL:0002622!1.48e-08!3;CL:0002504!1.55e-08!3;CL:1000279!1.55e-08!3;CL:1000280!1.55e-08!3;CL:0002579!3.03e-08!3;CL:0000057!6.42e-08!75;CL:0000197!9.68e-08!6;CL:0000098!9.68e-08!6;CL:0002167!9.68e-08!6;CL:0002580!1.25e-07!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0002615;2.91e-22;3!CL:0000197;3.60e-20;6!CL:0000098;3.60e-20;6!CL:0002167;3.60e-20;6!CL:0000138;2.66e-11;6!CL:0002579;1.83e-10;3!CL:0002622;1.83e-10;3!CL:0002504;2.87e-10;3!CL:1000279;2.87e-10;3!CL:1000280;2.87e-10;3!CL:0000710;4.71e-09;20!CL:0000136;5.21e-09;13!CL:0000153;1.08e-07;9!CL:0000447;1.08e-07;9 | ||
|ontology_enrichment_disease=DOID:17;7.93e-07;5!DOID:450;7.93e-07;5!DOID:66;7.93e-07;5!DOID:423;7.93e-07;5!DOID:0080000;7.93e-07;5!DOID:11722;7.93e-07;5 | |ontology_enrichment_celltype_v019_2=CL:0002615,2.10e-22,3;CL:0000197,3.44e-20,6;CL:0000098,3.44e-20,6;CL:0002167,3.44e-20,6;CL:0000058,3.53e-11,6;CL:0000138,3.53e-11,6;CL:0002579,1.97e-10,3;CL:0002622,2.16e-10,3;CL:0002504,2.74e-10,3;CL:1000279,2.74e-10,3;CL:1000280,2.74e-10,3;CL:0000710,4.14e-09,20;CL:0000136,7.72e-08,15;CL:0000153,1.29e-07,9;CL:0000447,1.29e-07,9 | ||
|ontology_enrichment_uberon=UBERON:0003688;9.75e-30;6!UBERON:0002358;9.75e-30;6!UBERON:0003684;9.75e-30;6!UBERON:0001178;9.75e-30;6!UBERON:0004457;8.39e-20;9!UBERON:0000042;8.39e-20;9!UBERON:0011135;9.56e-07;5!UBERON:0002216;9.56e-07;5!UBERON:0011134;9.56e-07;5!UBERON:0002209;9.56e-07;5!UBERON:0002213;9.56e-07;5!UBERON:0007844;9.56e-07;5!UBERON:0011138;9.56e-07;5!UBERON:0001130;9.56e-07;5!UBERON:0001066;9.56e-07;5!UBERON:0001468;9.56e-07;5 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:17!1.11e-08!5;DOID:450!1.11e-08!5;DOID:66!1.11e-08!5;DOID:423!1.11e-08!5;DOID:0080000!1.11e-08!5;DOID:11722!1.11e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:17;7.93e-07;5!DOID:450;7.93e-07;5!DOID:66;7.93e-07;5!DOID:423;7.93e-07;5!DOID:0080000;7.93e-07;5!DOID:11722;7.93e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,7.94e-07,5;DOID:450,7.94e-07,5;DOID:66,7.94e-07,5;DOID:423,7.94e-07,5;DOID:0080000,7.94e-07,5;DOID:11722,7.94e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0003688!1.67e-15!6;UBERON:0002358!1.67e-15!6;UBERON:0003684!1.67e-15!6;UBERON:0001178!1.67e-15!6;UBERON:0003102!5.04e-10!95;UBERON:0004457!1.15e-09!12;UBERON:0000042!1.15e-09!12;UBERON:0000475!9.91e-09!365;UBERON:0000161!2.18e-08!35;UBERON:0000162!2.31e-07!14;UBERON:0001353!2.31e-07!14;UBERON:0000163!2.31e-07!14;UBERON:0006866!2.31e-07!14;UBERON:0000164!2.31e-07!14;UBERON:0000931!2.31e-07!14;UBERON:0004122!8.42e-07!15;UBERON:0003937!8.42e-07!12;UBERON:0005399!8.42e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;9.75e-30;6!UBERON:0002358;9.75e-30;6!UBERON:0003684;9.75e-30;6!UBERON:0001178;9.75e-30;6!UBERON:0004457;8.39e-20;9!UBERON:0000042;8.39e-20;9!UBERON:0011135;9.56e-07;5!UBERON:0002216;9.56e-07;5!UBERON:0011134;9.56e-07;5!UBERON:0002209;9.56e-07;5!UBERON:0002213;9.56e-07;5!UBERON:0007844;9.56e-07;5!UBERON:0011138;9.56e-07;5!UBERON:0001130;9.56e-07;5!UBERON:0001066;9.56e-07;5!UBERON:0001468;9.56e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,8.17e-30,6;UBERON:0002358,8.17e-30,6;UBERON:0003684,8.17e-30,6;UBERON:0001178,8.17e-30,6;UBERON:0004457,7.37e-15,12;UBERON:0000042,7.37e-15,12;UBERON:0011135,9.70e-07,5;UBERON:0002216,9.70e-07,5;UBERON:0011134,9.70e-07,5;UBERON:0002209,9.70e-07,5;UBERON:0002213,9.70e-07,5;UBERON:0005856,9.70e-07,5;UBERON:0005866,9.70e-07,5;UBERON:0005863,9.70e-07,5;UBERON:0007844,9.70e-07,5;UBERON:0011138,9.70e-07,5;UBERON:0001130,9.70e-07,5;UBERON:0001066,9.70e-07,5;UBERON:0001468,9.70e-07,5 | |||
|phase1_expression=0.726713517082227,1.07050261945492,1.69145284915165,4.00293193412522,2.23480547213644,0,0,0,0,0,0,0,0,1.11389717664042,0.994192127183747,0,0,0,0,0.123121058076788,0,0.940364164434263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,1.00267582127178,6.80778639115871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63323337003915,0,2.06651562351531,0,0,0,0,0,0,0.554128230968366,0,0,0,0,0,0.640672166455702,4.02670612203168,0.600182192168805,3.40073346486848,0.515281080091258,0.18611685633159,0,0.292311015483596,0,4.97069452668416,0.484938170456436,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.434343920002738,1.64381058040307,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,17.1768088406796,0,0,8.7347761842939,7.49401752948079,2.36553622550902,9.95702027438062,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,0.306923946576125,0.280660094433074,0.256278298511402,2.04682899626681,1.28683136914886,0,0,0,0,0,0,0,0,0,1.03333003348146,0.728364672026868,2.49136388422906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0.290033387828457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0.855877976067841,0,0,0.899362287916574,1.64722217841633,1.06031162111118,0,0,0,0.975267478179181,0,0,0.136499911407986,0.565621727814851,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511343412510774,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453411851024545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60342272946051,0,0,0.691259661814092,0,0,0,0.423387050190929,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0.475680363110274,0,0,0,0.0771741581079447,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0.244482888365733,0,0,0,0 | |phase1_expression=0.726713517082227,1.07050261945492,1.69145284915165,4.00293193412522,2.23480547213644,0,0,0,0,0,0,0,0,1.11389717664042,0.994192127183747,0,0,0,0,0.123121058076788,0,0.940364164434263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,1.00267582127178,6.80778639115871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63323337003915,0,2.06651562351531,0,0,0,0,0,0,0.554128230968366,0,0,0,0,0,0.640672166455702,4.02670612203168,0.600182192168805,3.40073346486848,0.515281080091258,0.18611685633159,0,0.292311015483596,0,4.97069452668416,0.484938170456436,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.434343920002738,1.64381058040307,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,17.1768088406796,0,0,8.7347761842939,7.49401752948079,2.36553622550902,9.95702027438062,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,0.306923946576125,0.280660094433074,0.256278298511402,2.04682899626681,1.28683136914886,0,0,0,0,0,0,0,0,0,1.03333003348146,0.728364672026868,2.49136388422906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0.290033387828457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0.855877976067841,0,0,0.899362287916574,1.64722217841633,1.06031162111118,0,0,0,0.975267478179181,0,0,0.136499911407986,0.565621727814851,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511343412510774,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453411851024545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60342272946051,0,0,0.691259661814092,0,0,0,0.423387050190929,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0.475680363110274,0,0,0,0.0771741581079447,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p2@ENST00000442937 | |short_description=p2@ENST00000442937 | ||
}} | }} |
Latest revision as of 18:25, 29 July 2015
Short description: | p2@ENST00000442937 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000442937_5end |
Coexpression cluster: | NA |
Association with transcript: | -179bp_to_ENST00000442937_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 2.10e-22 | 3 |
receptor cell | 3.44e-20 | 6 |
sensory epithelial cell | 3.44e-20 | 6 |
olfactory epithelial cell | 3.44e-20 | 6 |
chondroblast | 3.53e-11 | 6 |
chondrocyte | 3.53e-11 | 6 |
omentum preadipocyte | 1.97e-10 | 3 |
prostate stromal cell | 2.16e-10 | 3 |
enteric smooth muscle cell | 2.74e-10 | 3 |
smooth muscle cell of large intestine | 2.74e-10 | 3 |
smooth muscle cell of colon | 2.74e-10 | 3 |
neurecto-epithelial cell | 4.14e-09 | 20 |
fat cell | 7.72e-08 | 15 |
GAG secreting cell | 1.29e-07 | 9 |
carbohydrate secreting cell | 1.29e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
omentum | 8.17e-30 | 6 |
peritoneum | 8.17e-30 | 6 |
abdominal cavity | 8.17e-30 | 6 |
visceral peritoneum | 8.17e-30 | 6 |
cavity lining | 7.37e-15 | 12 |
serous membrane | 7.37e-15 | 12 |
intervertebral cartilage | 9.70e-07 | 5 |
symphysis | 9.70e-07 | 5 |
nonsynovial joint | 9.70e-07 | 5 |
fibrous joint | 9.70e-07 | 5 |
cartilaginous joint | 9.70e-07 | 5 |
developing mesenchymal condensation | 9.70e-07 | 5 |
pre-cartilage condensation | 9.70e-07 | 5 |
cartilaginous condensation | 9.70e-07 | 5 |
cartilage element | 9.70e-07 | 5 |
post-cranial axial skeletal system | 9.70e-07 | 5 |
vertebral column | 9.70e-07 | 5 |
intervertebral disk | 9.70e-07 | 5 |
intervertebral joint | 9.70e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.94e-07 | 5 |
myotonic disease | 7.94e-07 | 5 |
muscle tissue disease | 7.94e-07 | 5 |
myopathy | 7.94e-07 | 5 |
muscular disease | 7.94e-07 | 5 |
myotonic dystrophy | 7.94e-07 | 5 |