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FFCP PHASE1:Hg19::chr3:191047131..191047219,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported
|DHSsupport=supported
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=152137
|EntrezGene=entrezgene:152137
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=18111
|HGNC=HGNC:18111
|TSSclassifier=weak
|TSSclassifier=strong
|UniProt=Q8IVM0
|UniProt=uniprot:Q8IVM0
|association_with_transcript=257bp_to_ENST00000392456,NM_174908,NM_178335,uc003fsv.2,uc003fsw.2_5end
|association_with_transcript=257bp_to_ENST00000392456,NM_174908,NM_178335,uc003fsv.2,uc003fsw.2_5end
|cluster_id=chr3:191047131..191047219,+
|description=CAGE_peak_1_at_CCDC50_5end
|description=CAGE_peak_1_at_CCDC50_5end
|id=chr3:191047131..191047219,+
|id=chr3:191047131..191047219,+

Revision as of 19:28, 29 July 2015

Short description:p1@CCDC50
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_1_at_CCDC50_5end
Coexpression cluster:NA
Association with transcript: 257bp_to_ENST00000392456, NM_174908, NM_178335, uc003fsv.2, uc003fsw.2_5end
EntrezGene:152137
HGNC: 18111
UniProt: Q8IVM0
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data