FFCP PHASE1:Hg19::chr3:86995827..86995868,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:86995827..86995868,- to FFCP PHASE1:Hg19::chr3:86995827..86995868,-: NSchange) |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:86995827..86995868,- | |||
|description=CAGE_peak_at_chr3:86995827..86995868,- | |||
|id=chr3:86995827..86995868,- | |||
|ontology_enrichment_celltype=CL:0000057!8.48e-10!75;CL:0002620!9.08e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0002615;7.85e-13;3!CL:0000136;4.31e-11;13!CL:0002616;2.16e-10;1!CL:0002581;6.91e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,9.38e-13,3;CL:0002616,2.16e-10,1;CL:0002581,5.30e-10,1;CL:0000136,1.42e-09,15 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.97e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4235;6.91e-10;1!DOID:17;6.65e-08;5!DOID:450;6.65e-08;5!DOID:66;6.65e-08;5!DOID:423;6.65e-08;5!DOID:0080000;6.65e-08;5!DOID:11722;6.65e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4235,6.91e-10,1;DOID:17,7.01e-08,5;DOID:450,7.01e-08,5;DOID:66,7.01e-08,5;DOID:423,7.01e-08,5;DOID:0080000,7.01e-08,5;DOID:11722,7.01e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!8.82e-07!45;UBERON:0002416!8.82e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0005406;1.56e-18;2!UBERON:0004457;1.84e-09;9!UBERON:0000042;1.84e-09;9!UBERON:0003688;7.69e-07;6!UBERON:0002358;7.69e-07;6!UBERON:0003684;7.69e-07;6!UBERON:0001178;7.69e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,1.20e-18,2;UBERON:0004457,3.46e-07,12;UBERON:0000042,3.46e-07,12;UBERON:0003688,8.39e-07,6;UBERON:0002358,8.39e-07,6;UBERON:0003684,8.39e-07,6;UBERON:0001178,8.39e-07,6 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,2.00146596706261,2.23480547213644,3.48935409640147,0,0,0,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0.286836620748814,0.354668382198357,0,0,0,0,0.269421344139376,0,0.302714855289863,0.576175924479999,0,0.624320153660641,0,0.298897361103602,0.23486899728753,0,0.280901613404497,0,0,0.103325781175765,0,0.494533858557114,0,0,0,0.125118519871964,0.554128230968366,0,0.612975591598039,0.600952235626387,0,1.07633781413317,0.213557388818567,0,0,2.67936576019941,0.515281080091258,0,0,0.68205903612839,0.504867548488229,0.736399189138395,1.61646056818812,0,0.705264687593482,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0.464367928031979,0.721879481669586,0.118306800039844,0.168584690078102,0,0.220587945464788,0.217879444092406,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.560655421726804,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.434343920002738,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0,0,2.17012018959788,0.623912584592421,0.713715955188647,0.788512075169673,0.585707074963566,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.744323423456331,0.153461973288062,0.280660094433074,0,0,0.321707842287215,1.48418066444991,0.154209693802656,0.355123450626254,0,0,0.116210378459959,0,0.200506470303285,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0.096670718292122,0.154048617114644,0.767518373630648,0.551346289938122,0.322260734604821,0.145016693914229,0.170453254832202,0,0,0,0.127612712494584,0,1.39453664789186,0,0,0,0,0,0,0,0,0,0.571890581771475,0,0,0.318203247925937,0,0.179872457583315,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0.682499557039929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,2.30506425071931,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0.71623345421307,0,6.45037474408387,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96414131712666,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0.46112780877612,0,0,0.31900115973192,0.274792780205587,6.39641731222362,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0.370691816839509,0,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0.0967563312890851,0,0.0821154570532092,0.0969890164884194,0.264768380074501,0,0,0.397429223405979,0,0.391102765469606,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,1.08803560673895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,1.63599316893057,0.554805861502613,0.189403005275089,1.25783950876288,0.889811221596536,0,1.05861646634267,0,0,0.318593534327405,0,0.310525913752519,0.414706207840855,0.53168342911599,0.521745061811734,0.150257608997218,0,0.406870733204662,0.363697318405119,0,0,0.398095888698616,0.400027764663154,0,0,0,0.192619830407303,0.643324774124777,0,0,0,0,0.179088841081487,0,0.438568099157414,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0.346576998451015,1.1441462864015,0.690359926060101,0,0,0.20170506870352,0.781514011233092,0.523813388962845,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,2.30626162422861,0,0,0,0,0,0,0.078493092850514,0,0.560544326627578,0,0,0,0,0,0,1.39086617842064,0,0,0.17071847709395,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07028081699812,0.11294608203896,0,0,0,0,0,0,0,0,0,0,1.35941691750254,0,0,0,0,0.352894871715692,0,0.730336388246517,0,0,0,0,0,0,0.743990036333503,0.462175628631418,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0.0717222053926763,0,0,0.213454691755431,0,0.179650404213174,0,0.244482888365733,0,0,0,0 | |phase1_expression=0,0.428201047781966,0.140954404095971,2.00146596706261,2.23480547213644,3.48935409640147,0,0,0,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0.286836620748814,0.354668382198357,0,0,0,0,0.269421344139376,0,0.302714855289863,0.576175924479999,0,0.624320153660641,0,0.298897361103602,0.23486899728753,0,0.280901613404497,0,0,0.103325781175765,0,0.494533858557114,0,0,0,0.125118519871964,0.554128230968366,0,0.612975591598039,0.600952235626387,0,1.07633781413317,0.213557388818567,0,0,2.67936576019941,0.515281080091258,0,0,0.68205903612839,0.504867548488229,0.736399189138395,1.61646056818812,0,0.705264687593482,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0.464367928031979,0.721879481669586,0.118306800039844,0.168584690078102,0,0.220587945464788,0.217879444092406,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.560655421726804,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.434343920002738,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0,0,2.17012018959788,0.623912584592421,0.713715955188647,0.788512075169673,0.585707074963566,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.744323423456331,0.153461973288062,0.280660094433074,0,0,0.321707842287215,1.48418066444991,0.154209693802656,0.355123450626254,0,0,0.116210378459959,0,0.200506470303285,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0.096670718292122,0.154048617114644,0.767518373630648,0.551346289938122,0.322260734604821,0.145016693914229,0.170453254832202,0,0,0,0.127612712494584,0,1.39453664789186,0,0,0,0,0,0,0,0,0,0.571890581771475,0,0,0.318203247925937,0,0.179872457583315,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0.682499557039929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,2.30506425071931,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0.71623345421307,0,6.45037474408387,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96414131712666,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0.46112780877612,0,0,0.31900115973192,0.274792780205587,6.39641731222362,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0.370691816839509,0,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0.0967563312890851,0,0.0821154570532092,0.0969890164884194,0.264768380074501,0,0,0.397429223405979,0,0.391102765469606,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,1.08803560673895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,1.63599316893057,0.554805861502613,0.189403005275089,1.25783950876288,0.889811221596536,0,1.05861646634267,0,0,0.318593534327405,0,0.310525913752519,0.414706207840855,0.53168342911599,0.521745061811734,0.150257608997218,0,0.406870733204662,0.363697318405119,0,0,0.398095888698616,0.400027764663154,0,0,0,0.192619830407303,0.643324774124777,0,0,0,0,0.179088841081487,0,0.438568099157414,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0.346576998451015,1.1441462864015,0.690359926060101,0,0,0.20170506870352,0.781514011233092,0.523813388962845,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,2.30626162422861,0,0,0,0,0,0,0.078493092850514,0,0.560544326627578,0,0,0,0,0,0,1.39086617842064,0,0,0.17071847709395,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07028081699812,0.11294608203896,0,0,0,0,0,0,0,0,0,0,1.35941691750254,0,0,0,0,0.352894871715692,0,0.730336388246517,0,0,0,0,0,0,0.743990036333503,0.462175628631418,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0.0717222053926763,0,0,0.213454691755431,0,0.179650404213174,0,0.244482888365733,0,0,0,0 | ||
|short_description=p@chr3:86995827..86995868,- | |||
}} | }} |
Latest revision as of 23:47, 29 July 2015
Short description: | p@chr3:86995827..86995868, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:86995827..86995868, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 9.38e-13 | 3 |
perirenal adipocyte cell | 2.16e-10 | 1 |
perirenal preadipocyte | 5.30e-10 | 1 |
fat cell | 1.42e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 1.20e-18 | 2 |
cavity lining | 3.46e-07 | 12 |
serous membrane | 3.46e-07 | 12 |
omentum | 8.39e-07 | 6 |
peritoneum | 8.39e-07 | 6 |
abdominal cavity | 8.39e-07 | 6 |
visceral peritoneum | 8.39e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
spindle cell sarcoma | 6.91e-10 | 1 |
musculoskeletal system disease | 7.01e-08 | 5 |
myotonic disease | 7.01e-08 | 5 |
muscle tissue disease | 7.01e-08 | 5 |
myopathy | 7.01e-08 | 5 |
muscular disease | 7.01e-08 | 5 |
myotonic dystrophy | 7.01e-08 | 5 |