FFCP PHASE1:Hg19::chr3:86995958..86995981,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:86995958..86995981,- | |||
|description=CAGE_peak_at_chr3:86995958..86995981,- | |description=CAGE_peak_at_chr3:86995958..86995981,- | ||
|id=chr3:86995958..86995981,- | |id=chr3:86995958..86995981,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000197;1.59e-11;6!CL:0000098;1.59e-11;6!CL:0002167;1.59e-11;6!CL:0002537;6.94e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,1.14e-11,6;CL:0000098,1.14e-11,6;CL:0002167,1.14e-11,6;CL:0002537,8.66e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.44e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1192;2.23e-11;3!DOID:3369;3.87e-09;1!DOID:3571;4.34e-09;1!DOID:4235;5.48e-09;1!DOID:1799;1.22e-08;1!DOID:10165;1.22e-08;1!DOID:1798;1.22e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1192,2.18e-11,3;DOID:3369,3.87e-09,1;DOID:3571,4.19e-09,1;DOID:4235,5.70e-09,1;DOID:1799,1.05e-08,1;DOID:10165,1.05e-08,1;DOID:1798,1.05e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;5.48e-09;1!UBERON:0005208;5.48e-09;1!UBERON:0004145;5.48e-09;1!UBERON:0005946;5.48e-09;1!UBERON:0005965;5.48e-09;1!UBERON:0002078;5.48e-09;1!UBERON:0002426;1.22e-08;1!UBERON:0003831;1.22e-08;1!UBERON:0003898;1.22e-08;1!UBERON:0004830;1.22e-08;1!UBERON:0003830;1.22e-08;1!UBERON:0005175;1.22e-08;1!UBERON:0001774;1.22e-08;1!UBERON:0001103;1.22e-08;1!UBERON:0005631;3.30e-07;10!UBERON:0000158;3.30e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,5.28e-09,1;UBERON:0005208,5.28e-09,1;UBERON:0005946,5.28e-09,1;UBERON:0005965,5.28e-09,1;UBERON:0002078,5.28e-09,1;UBERON:0002426,9.02e-09,1;UBERON:0003831,9.02e-09,1;UBERON:0003898,9.02e-09,1;UBERON:0004830,9.02e-09,1;UBERON:0003830,9.02e-09,1;UBERON:0005175,9.02e-09,1;UBERON:0001774,9.02e-09,1;UBERON:0001103,9.02e-09,1;UBERON:0010084,9.02e-09,1;UBERON:0005631,9.94e-09,14;UBERON:0000158,9.94e-09,14 | |||
|phase1_expression=0,0,0.422863212287913,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.289693037921647,0,0,0,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,4.47274756525787,0,0,0,0,0.560677600142307,0,0,0,0,0.163461903113459,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0.741800787835671,0,0,0,0,0.277064115484183,0,1.5324389789951,0.751190294532984,0,0.179389635688862,0.427114777637135,0.423863802319124,0,0.515262646192195,0,0.18611685633159,0,0.194874010322397,0.252433774244115,0.552299391853796,0,0,0,0.508681776931463,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0.821905290201534,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0.831883446123229,1.42743191037729,1.73472656537328,1.7571212248907,0,0,0,0,0.368738337083406,0.173767228936166,0,0,0,0,0,0,0,0,0.496215615637554,0.153461973288062,0,0.384417447767103,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54561517471583,0,0,0,0,0,0.096670718292122,0,0.307007349452259,0.137836572484531,0.107420244868274,0.145016693914229,0.511359764496605,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0.632758849437452,0.571890581771475,0,2.99557291623744,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0.329294892959902,0,0.349934720244983,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0.71623345421307,1.18785872333055,2.15012491469462,0,0,0,0.494411622680279,0,0,0,0,0,0,0.622079175323615,0,0.179021174675609,0,0.197286811273867,0,0,0,0,0,0,0,1.44999915086959,0,0,10.6374456795571,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0.341826167541004,1.1528195219403,0,0.108647371922008,0.638002319463839,0.0915975934018623,1.5991043280559,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0.611030144933625,0.296521128680622,0.123563938946503,0,0,1.60515529459758,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.34945333648406,0,0.0967563312890851,0.219267951258557,0,0.0969890164884194,0.0882561266915003,0,0,0.596143835108969,0,1.36885967914362,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0,0,2.87149209830726,0,0,0,0,3.60299883542404,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0.383830394638891,0,0.662091970365432,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0.129282956361551,0,0.171086837884329,0,0.320362237703084,0.157204305099666,0.414239055347196,0,0,0,0,1.08803560673895,0,0.306345576763462,0.655745261419609,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0.889811221596536,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0.380805212168795,0,0,0,0,0.398095888698616,0,0,0,0,0.192619830407303,1.92997432237433,0,0.226705925512272,0.231522474323834,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0.245772908753719,0,0.19998739585493,0,0,0,0.552317850755522,0,0,0,0,0,0,0,0.212574920101683,0,0.558644917973244,5.40607396110812,0,0,0.705351887381368,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0.183428598521679,1.38630799380406,1.90691047733584,0,0,0.0752103283492573,0,0,1.57144016688853,0.49131575253029,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,5.23343983959569,0,0,0,0,0,0.222462803784138,0.313972371402056,0,0.280272163313789,0,0,0,0.0714765441766563,0,0,3.12944890144643,0.801711364730253,0.414432328326074,0.3414369541879,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0.971421986118279,0,0,0.475680363110274,0.79062257427272,0,0,0,0,0,0,0,0,0,0,2.20905249094162,0.0939839179798536,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0.5290268405154,0.371995018166751,0.462175628631418,0,0.126166424835079,0,0,0.101988829741982,0,0,0,0.151557396436479,0,0,0,0,0.23806443146374,0,0,0.672791175483681,0,0.202117188958219,0,0,0,0,0,0.0814032686109745,0.320182037633146,0,0,0,0.122241444182866,0,0,0.805095174364105,0 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|phase1_expression=0,0,0.422863212287913,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.289693037921647,0,0,0,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,4.47274756525787,0,0,0,0,0.560677600142307,0,0,0,0,0.163461903113459,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0.741800787835671,0,0,0,0,0.277064115484183,0,1.5324389789951,0.751190294532984,0,0.179389635688862,0.427114777637135,0.423863802319124,0,0.515262646192195,0,0.18611685633159,0,0.194874010322397,0.252433774244115,0.552299391853796,0,0,0,0.508681776931463,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0.821905290201534,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0.831883446123229,1.42743191037729,1.73472656537328,1.7571212248907,0,0,0,0,0.368738337083406,0.173767228936166,0,0,0,0,0,0,0,0,0.496215615637554,0.153461973288062,0,0.384417447767103,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54561517471583,0,0,0,0,0,0.096670718292122,0,0.307007349452259,0.137836572484531,0.107420244868274,0.145016693914229,0.511359764496605,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0.632758849437452,0.571890581771475,0,2.99557291623744,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0.329294892959902,0,0.349934720244983,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0.71623345421307,1.18785872333055,2.15012491469462,0,0,0,0.494411622680279,0,0,0,0,0,0,0.622079175323615,0,0.179021174675609,0,0.197286811273867,0,0,0,0,0,0,0,1.44999915086959,0,0,10.6374456795571,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0.341826167541004,1.1528195219403,0,0.108647371922008,0.638002319463839,0.0915975934018623,1.5991043280559,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0.611030144933625,0.296521128680622,0.123563938946503,0,0,1.60515529459758,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.34945333648406,0,0.0967563312890851,0.219267951258557,0,0.0969890164884194,0.0882561266915003,0,0,0.596143835108969,0,1.36885967914362,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0,0,2.87149209830726,0,0,0,0,3.60299883542404,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0.383830394638891,0,0.662091970365432,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0.129282956361551,0,0.171086837884329,0,0.320362237703084,0.157204305099666,0.414239055347196,0,0,0,0,1.08803560673895,0,0.306345576763462,0.655745261419609,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0.889811221596536,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0.380805212168795,0,0,0,0,0.398095888698616,0,0,0,0,0.192619830407303,1.92997432237433,0,0.226705925512272,0.231522474323834,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0.245772908753719,0,0.19998739585493,0,0,0,0.552317850755522,0,0,0,0,0,0,0,0.212574920101683,0,0.558644917973244,5.40607396110812,0,0,0.705351887381368,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0.183428598521679,1.38630799380406,1.90691047733584,0,0,0.0752103283492573,0,0,1.57144016688853,0.49131575253029,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,5.23343983959569,0,0,0,0,0,0.222462803784138,0.313972371402056,0,0.280272163313789,0,0,0,0.0714765441766563,0,0,3.12944890144643,0.801711364730253,0.414432328326074,0.3414369541879,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0.971421986118279,0,0,0.475680363110274,0.79062257427272,0,0,0,0,0,0,0,0,0,0,2.20905249094162,0.0939839179798536,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0.5290268405154,0.371995018166751,0.462175628631418,0,0.126166424835079,0,0,0.101988829741982,0,0,0,0.151557396436479,0,0,0,0,0.23806443146374,0,0,0.672791175483681,0,0.202117188958219,0,0,0,0,0,0.0814032686109745,0.320182037633146,0,0,0,0.122241444182866,0,0,0.805095174364105,0 | ||
|short_description=p@chr3:86995958..86995981,- | |short_description=p@chr3:86995958..86995981,- | ||
}} | }} |
Latest revision as of 23:47, 29 July 2015
Short description: | p@chr3:86995958..86995981, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:86995958..86995981, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 1.14e-11 | 6 |
sensory epithelial cell | 1.14e-11 | 6 |
olfactory epithelial cell | 1.14e-11 | 6 |
amnion mesenchymal stem cell | 8.66e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 5.28e-09 | 1 |
right atrium valve | 5.28e-09 | 1 |
outflow tract of atrium | 5.28e-09 | 1 |
outflow part of right atrium | 5.28e-09 | 1 |
right cardiac atrium | 5.28e-09 | 1 |
chest muscle | 9.02e-09 | 1 |
respiratory system muscle | 9.02e-09 | 1 |
skeletal muscle of trunk | 9.02e-09 | 1 |
respiratory system skeletal muscle | 9.02e-09 | 1 |
thoracic segment muscle | 9.02e-09 | 1 |
chest organ | 9.02e-09 | 1 |
muscle of trunk | 9.02e-09 | 1 |
diaphragm | 9.02e-09 | 1 |
future diaphragm | 9.02e-09 | 1 |
extraembryonic membrane | 9.94e-09 | 14 |
membranous layer | 9.94e-09 | 14 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 2.18e-11 | 3 |
peripheral primitive neuroectodermal tumor | 3.87e-09 | 1 |
liver cancer | 4.19e-09 | 1 |
spindle cell sarcoma | 5.70e-09 | 1 |
islet cell tumor | 1.05e-08 | 1 |
endocrine pancreas cancer | 1.05e-08 | 1 |
pancreatic endocrine carcinoma | 1.05e-08 | 1 |