FFCP PHASE1:Hg19::chr4:188228506..188228525,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:188228506..188228525,+ | |||
|coexpression_cluster_id=C515 | |||
|description=CAGE_peak_at_chr4:188228506..188228525,+ | |description=CAGE_peak_at_chr4:188228506..188228525,+ | ||
|id=chr4:188228506..188228525,+ | |id=chr4:188228506..188228525,+ | ||
|ontology_enrichment_celltype=CL:0002077!4.75e-12!33;CL:0002368!1.13e-11!13;CL:0002159!2.51e-11!13;CL:0000066!6.64e-10!254;CL:0000244!1.21e-09!4;CL:0000731!1.21e-09!4;CL:0002076!1.27e-09!43;CL:0002620!1.55e-09!23;CL:0000220!1.82e-08!246;CL:0002321!2.69e-08!248;CL:0000515!3.36e-08!4;CL:0000197!5.20e-07!6;CL:0000098!5.20e-07!6;CL:0002167!5.20e-07!6;CL:0002328!5.49e-07!3;CL:0002166!5.83e-07!3;CL:0002621!6.56e-07!3;CL:0000223!9.26e-07!59 | |ontology_enrichment_celltype=CL:0002077!4.75e-12!33;CL:0002368!1.13e-11!13;CL:0002159!2.51e-11!13;CL:0000066!6.64e-10!254;CL:0000244!1.21e-09!4;CL:0000731!1.21e-09!4;CL:0002076!1.27e-09!43;CL:0002620!1.55e-09!23;CL:0000220!1.82e-08!246;CL:0002321!2.69e-08!248;CL:0000515!3.36e-08!4;CL:0000197!5.20e-07!6;CL:0000098!5.20e-07!6;CL:0002167!5.20e-07!6;CL:0002328!5.49e-07!3;CL:0002166!5.83e-07!3;CL:0002621!6.56e-07!3;CL:0000223!9.26e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002368;9.95e-19;13!CL:0000244;9.15e-18;4!CL:0000731;9.15e-18;4!CL:0002076;1.40e-13;42!CL:0002328;2.02e-12;3!CL:0002159;6.67e-10;14!CL:0000317;2.27e-09;2!CL:1000448;2.27e-09;2!CL:0002308;2.27e-09;2!CL:0002140;2.27e-09;2!CL:0000056;3.90e-09;4!CL:0000362;1.85e-07;9!CL:0002202;3.27e-07;9!CL:0002632;3.27e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,1.35e-18,13;CL:0000244,9.39e-18,4;CL:0000731,9.39e-18,4;CL:0002076,1.23e-15,42;CL:0002328,1.91e-12,3;CL:0000223,3.35e-12,58;CL:0002159,5.37e-10,14;CL:0000317,2.14e-09,2;CL:1000448,2.14e-09,2;CL:0002308,2.14e-09,2;CL:0002140,2.14e-09,2;CL:0000515,4.14e-09,4;CL:0000362,1.83e-07,9;CL:0002202,3.30e-07,9;CL:0002632,3.30e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000515;3.90e-09;4!CL:0000223;1.20e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002097!1.89e-11!40;UBERON:0002199!1.22e-09!45;UBERON:0002416!1.22e-09!45;UBERON:0003102!1.66e-08!95;UBERON:0002090!4.06e-08!6;UBERON:0000365!1.17e-07!5;UBERON:0004815!5.49e-07!3;UBERON:0002031!5.49e-07!3;UBERON:0001949!6.56e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;3.19e-14;5!UBERON:0004815;2.02e-12;3!UBERON:0002031;2.02e-12;3!UBERON:0000486;3.71e-12;12!UBERON:0005910;7.41e-12;6!UBERON:0002419;2.27e-09;2!UBERON:0007771;2.27e-09;2!UBERON:0003297;2.27e-09;2!UBERON:0001821;2.27e-09;2!UBERON:0003487;2.27e-09;2!UBERON:0001820;2.27e-09;2!UBERON:0002185;1.25e-07;5!UBERON:0005911;1.46e-07;36!UBERON:0002097;4.04e-07;41!UBERON:0002199;6.21e-07;46!UBERON:0002416;6.21e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,3.25e-14,5;UBERON:0004815,1.91e-12,3;UBERON:0002031,1.91e-12,3;UBERON:0005910,7.54e-12,6;UBERON:0002097,1.88e-09,41;UBERON:0002419,2.14e-09,2;UBERON:0007771,2.14e-09,2;UBERON:0003297,2.14e-09,2;UBERON:0001821,2.14e-09,2;UBERON:0003487,2.14e-09,2;UBERON:0001820,2.14e-09,2;UBERON:0005089,2.14e-09,2;UBERON:0005088,2.14e-09,2;UBERON:0003102,8.62e-09,99;UBERON:0002199,3.43e-08,46;UBERON:0002416,3.43e-08,46;UBERON:0002185,1.21e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.495065411840187,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.51652734687356,1.8072355126695,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,5.23312862571041,1.98788780678127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.358779271377724,1.06778694409284,0.423863802319124,0,0,3.86460810068444,3.53622027030021,0.506328996723799,0.876933046450788,0.757301322732344,1.01254888506529,0,1.06502877754984,0.705264687593482,1.69560592310488,0.773043412653187,1.90922284413584,5.44928731239107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.60967095213783,0,0,0,0,0,0,0,0.171567810298526,9.98727597218493,0,1.40740561376283,2.68506490959736,0,0,0,0,0,1.15493158208859,0,0,0,0,0,0,0,0.93733833986777,1.84780341018745,5.95455408418023,0.179117045405697,1.45316969256981,4.21720947081732,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,1.44781306667579,1.2328579353023,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0,0.35142424497814,1.20378439891088,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,1.38115775959256,0.280660094433074,0,0,0,0,0,0,0,0,0,0,21.6546987927548,1.28913384510255,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,9.18824860793876,3.90036147621913,0,0,0,0,0.137836572484531,0,0.290033387828457,0.0852266274161009,0.0890320356467374,11.5699440752685,2.49847087574638,37.0076866234294,1.0115778085555,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.876901770507525,0,0,1.62328301570163,0,0.281695602532241,0,0.0982490410131212,1.426684205925,0,0,0,0,0,0.962221127255121,3.35151137767894,0,0,11.193139689452,26.9554361068201,10.6423236848802,13.3239572120036,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.3980688668688,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391969589657511,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,1.72844298240254,0,0,0,1.70388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,1.04349012362347,0,18.659455396271,0,0,0,0,3.58286299828754,5.60038870528415,0,0,12.6184898228651,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52552838186867,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0.638812138197976,0,0,0,0,0,0,0,0,0,0,0.556157009460346,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.495065411840187,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.51652734687356,1.8072355126695,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,5.23312862571041,1.98788780678127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.358779271377724,1.06778694409284,0.423863802319124,0,0,3.86460810068444,3.53622027030021,0.506328996723799,0.876933046450788,0.757301322732344,1.01254888506529,0,1.06502877754984,0.705264687593482,1.69560592310488,0.773043412653187,1.90922284413584,5.44928731239107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.60967095213783,0,0,0,0,0,0,0,0.171567810298526,9.98727597218493,0,1.40740561376283,2.68506490959736,0,0,0,0,0,1.15493158208859,0,0,0,0,0,0,0,0.93733833986777,1.84780341018745,5.95455408418023,0.179117045405697,1.45316969256981,4.21720947081732,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,1.44781306667579,1.2328579353023,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0,0.35142424497814,1.20378439891088,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,1.38115775959256,0.280660094433074,0,0,0,0,0,0,0,0,0,0,21.6546987927548,1.28913384510255,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,9.18824860793876,3.90036147621913,0,0,0,0,0.137836572484531,0,0.290033387828457,0.0852266274161009,0.0890320356467374,11.5699440752685,2.49847087574638,37.0076866234294,1.0115778085555,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.876901770507525,0,0,1.62328301570163,0,0.281695602532241,0,0.0982490410131212,1.426684205925,0,0,0,0,0,0.962221127255121,3.35151137767894,0,0,11.193139689452,26.9554361068201,10.6423236848802,13.3239572120036,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.3980688668688,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391969589657511,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,1.72844298240254,0,0,0,1.70388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,1.04349012362347,0,18.659455396271,0,0,0,0,3.58286299828754,5.60038870528415,0,0,12.6184898228651,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52552838186867,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0.638812138197976,0,0,0,0,0,0,0,0,0,0,0.556157009460346,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:188228506..188228525,+ | |short_description=p@chr4:188228506..188228525,+ | ||
}} | }} |
Latest revision as of 04:11, 30 July 2015
Short description: | p@chr4:188228506..188228525, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:188228506..188228525, + |
Coexpression cluster: | C515_Small_Urothelial_Sebocyte_Prostate_Bronchial_Mallassezderived_Esophageal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 1.35e-18 | 13 |
transitional epithelial cell | 9.39e-18 | 4 |
urothelial cell | 9.39e-18 | 4 |
endo-epithelial cell | 1.23e-15 | 42 |
bronchial epithelial cell | 1.91e-12 | 3 |
endodermal cell | 3.35e-12 | 58 |
general ecto-epithelial cell | 5.37e-10 | 14 |
sebum secreting cell | 2.14e-09 | 2 |
epithelial cell of sweat gland | 2.14e-09 | 2 |
epithelial cell of skin gland | 2.14e-09 | 2 |
acinar cell of sebaceous gland | 2.14e-09 | 2 |
skeletal muscle myoblast | 4.14e-09 | 4 |
epidermal cell | 1.83e-07 | 9 |
epithelial cell of tracheobronchial tree | 3.30e-07 | 9 |
epithelial cell of lower respiratory tract | 3.30e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
urothelium | 3.25e-14 | 5 |
lower respiratory tract epithelium | 1.91e-12 | 3 |
epithelium of bronchus | 1.91e-12 | 3 |
transitional epithelium | 7.54e-12 | 6 |
skin of body | 1.88e-09 | 41 |
skin gland | 2.14e-09 | 2 |
epidermis gland | 2.14e-09 | 2 |
gland of integumental system | 2.14e-09 | 2 |
sebaceous gland | 2.14e-09 | 2 |
skin sebaceous gland | 2.14e-09 | 2 |
sweat gland | 2.14e-09 | 2 |
sweat gland placode | 2.14e-09 | 2 |
sebaceous gland placode | 2.14e-09 | 2 |
surface structure | 8.62e-09 | 99 |
integument | 3.43e-08 | 46 |
integumental system | 3.43e-08 | 46 |
bronchus | 1.21e-07 | 5 |