FFCP PHASE1:Hg19::chr4:19457065..19457081,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=6bp_to_ENST00000511431_5end | |association_with_transcript=6bp_to_ENST00000511431_5end | ||
|cluster_id=chr4:19457065..19457081,+ | |||
|description=CAGE_peak_2_at_ENST00000511431_5end | |description=CAGE_peak_2_at_ENST00000511431_5end | ||
|id=chr4:19457065..19457081,+ | |id=chr4:19457065..19457081,+ | ||
|ontology_enrichment_celltype=CL:0002149!6.21e-09!6;CL:0002255!6.21e-09!6 | |ontology_enrichment_celltype=CL:0002149!6.21e-09!6;CL:0002255!6.21e-09!6 | ||
|ontology_enrichment_celltype_v019=CL:0002149;1.33e-08;6!CL:0002255;1.33e-08;6!CL:0000319;6.57e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,1.38e-08,6;CL:0002255,1.38e-08,6;CL:0000319,6.59e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.65e-22!143;DOID:305!3.89e-18!106;DOID:14566!1.20e-17!239;DOID:162!1.11e-16!235;DOID:299!7.82e-13!25;DOID:3001!6.21e-09!6;DOID:0050686!1.95e-07!137;DOID:1325!2.50e-07!7;DOID:3904!2.50e-07!7;DOID:120!4.18e-07!27 | |ontology_enrichment_disease=DOID:0050687!1.65e-22!143;DOID:305!3.89e-18!106;DOID:14566!1.20e-17!239;DOID:162!1.11e-16!235;DOID:299!7.82e-13!25;DOID:3001!6.21e-09!6;DOID:0050686!1.95e-07!137;DOID:1325!2.50e-07!7;DOID:3904!2.50e-07!7;DOID:120!4.18e-07!27 | ||
|ontology_enrichment_disease_v019=DOID:299;2.26e-12;25!DOID:154;1.18e-11;2!DOID:4236;1.18e-11;2!DOID:120;3.56e-11;27!DOID:4468;3.63e-11;2!DOID:193;2.55e-10;29!DOID:4362;6.03e-10;5!DOID:3001;1.33e-08;6!DOID:305;7.45e-08;106!DOID:0050687;1.05e-07;143!DOID:1325;3.16e-07;7!DOID:3904;3.16e-07;7!DOID:3030;6.57e-07;1!DOID:0050619;8.88e-07;1!DOID:1357;8.88e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,7.37e-21,143;DOID:305,6.25e-19,106;DOID:14566,5.70e-17,239;DOID:162,3.51e-16,235;DOID:299,3.24e-12,25;DOID:154,5.45e-12,2;DOID:4236,5.45e-12,2;DOID:120,4.53e-11,27;DOID:4468,7.88e-11,2;DOID:193,3.19e-10,29;DOID:4362,6.15e-10,5;DOID:3001,1.38e-08,6;DOID:0050686,3.59e-08,137;DOID:1325,2.81e-07,7;DOID:3904,2.81e-07,7;DOID:3030,6.59e-07,1;DOID:0050619,8.21e-07,1;DOID:1357,8.21e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005795!3.33e-09!22;UBERON:0005156!2.25e-08!59;UBERON:0000990!2.25e-08!59;UBERON:0000995!3.80e-08!21;UBERON:0003133!7.14e-08!48;UBERON:0004175!8.99e-08!25;UBERON:0003975!1.14e-07!22;UBERON:0003134!1.28e-07!37;UBERON:0000474!1.28e-07!37 | |ontology_enrichment_uberon=UBERON:0005795!3.33e-09!22;UBERON:0005156!2.25e-08!59;UBERON:0000990!2.25e-08!59;UBERON:0000995!3.80e-08!21;UBERON:0003133!7.14e-08!48;UBERON:0004175!8.99e-08!25;UBERON:0003975!1.14e-07!22;UBERON:0003134!1.28e-07!37;UBERON:0000474!1.28e-07!37 | ||
|ontology_enrichment_uberon_v019=UBERON:0000995;1.21e-10;17!UBERON:0003975;5.12e-10;18!UBERON:0000474;1.16e-09;37!UBERON:0003134;1.35e-08;33!UBERON:0004175;1.69e-08;21!UBERON:0000002;2.31e-08;6!UBERON:0001560;2.31e-08;6!UBERON:0003100;4.04e-07;41!UBERON:0001764;8.88e-07;1!UBERON:0001825;8.88e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000995,2.44e-11,21;UBERON:0005795,8.82e-11,22;UBERON:0003975,8.82e-11,22;UBERON:0003134,6.70e-10,37;UBERON:0000474,6.70e-10,37;UBERON:0004175,2.24e-09,25;UBERON:0003100,8.70e-09,41;UBERON:0000002,2.35e-08,6;UBERON:0001560,2.35e-08,6;UBERON:0003133,2.75e-07,48;UBERON:0005156,4.57e-07,59;UBERON:0000990,4.57e-07,59;UBERON:0001764,8.21e-07,1;UBERON:0001825,8.21e-07,1 | |||
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| ||
|short_description=p2@ENST00000511431 | |short_description=p2@ENST00000511431 | ||
}} | }} |
Latest revision as of 04:15, 30 July 2015
Short description: | p2@ENST00000511431 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000511431_5end |
Coexpression cluster: | NA |
Association with transcript: | 6bp_to_ENST00000511431_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 1.38e-08 | 6 |
stromal cell of endometrium | 1.38e-08 | 6 |
mucus secreting cell | 6.59e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
uterus | 2.44e-11 | 21 |
embryonic uterus | 8.82e-11 | 22 |
internal female genitalia | 8.82e-11 | 22 |
female reproductive organ | 6.70e-10 | 37 |
female reproductive system | 6.70e-10 | 37 |
internal genitalia | 2.24e-09 | 25 |
female organism | 8.70e-09 | 41 |
uterine cervix | 2.35e-08 | 6 |
neck of organ | 2.35e-08 | 6 |
reproductive organ | 2.75e-07 | 48 |
reproductive structure | 4.57e-07 | 59 |
reproductive system | 4.57e-07 | 59 |
maxillary sinus | 8.21e-07 | 1 |
paranasal sinus | 8.21e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 7.37e-21 | 143 |
carcinoma | 6.25e-19 | 106 |
disease of cellular proliferation | 5.70e-17 | 239 |
cancer | 3.51e-16 | 235 |
adenocarcinoma | 3.24e-12 | 25 |
mixed cell type cancer | 5.45e-12 | 2 |
carcinosarcoma | 5.45e-12 | 2 |
female reproductive organ cancer | 4.53e-11 | 27 |
clear cell adenocarcinoma | 7.88e-11 | 2 |
reproductive organ cancer | 3.19e-10 | 29 |
cervical cancer | 6.15e-10 | 5 |
female reproductive endometrioid cancer | 1.38e-08 | 6 |
organ system cancer | 3.59e-08 | 137 |
bronchus cancer | 2.81e-07 | 7 |
bronchogenic carcinoma | 2.81e-07 | 7 |
mucinous adenocarcinoma | 6.59e-07 | 1 |
paranasal sinus cancer | 8.21e-07 | 1 |
maxillary sinus cancer | 8.21e-07 | 1 |