FFCP PHASE1:Hg19::chr4:20253897..20253905,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:20253897..20253905,+ | |||
|coexpression_cluster_id=C429 | |||
|description=CAGE_peak_at_chr4:20253897..20253905,+ | |description=CAGE_peak_at_chr4:20253897..20253905,+ | ||
|id=chr4:20253897..20253905,+ | |id=chr4:20253897..20253905,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.48e-40;5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:7;4.53e-08;39 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!8.20e-19!22;UBERON:0001869!4.89e-18!32;UBERON:0001893!9.52e-17!34;UBERON:0000956!3.19e-16!25;UBERON:0000203!3.19e-16!25;UBERON:0002791!3.15e-15!33;UBERON:0001950!3.95e-15!20;UBERON:0002020!1.13e-14!34;UBERON:0003528!1.13e-14!34;UBERON:0007023!2.02e-13!115;UBERON:0002780!3.24e-13!41;UBERON:0001890!3.24e-13!41;UBERON:0006240!3.24e-13!41;UBERON:0003080!8.30e-13!42;UBERON:0000955!1.51e-12!69;UBERON:0006238!1.51e-12!69;UBERON:0001049!5.05e-12!57;UBERON:0005068!5.05e-12!57;UBERON:0006241!5.05e-12!57;UBERON:0007135!5.05e-12!57;UBERON:0002616!1.87e-11!59;UBERON:0001017!1.06e-10!82;UBERON:0000073!2.59e-10!94;UBERON:0001016!2.59e-10!94;UBERON:0005743!6.03e-10!86;UBERON:0003056!1.08e-08!61;UBERON:0000349!2.61e-08!5;UBERON:0003075!4.31e-08!86;UBERON:0007284!4.31e-08!86;UBERON:0000153!1.19e-07!129;UBERON:0007811!1.19e-07!129;UBERON:0000033!1.53e-07!123;UBERON:0002346!1.64e-07!90;UBERON:0000200!4.82e-07!6 | |ontology_enrichment_uberon=UBERON:0002619!8.20e-19!22;UBERON:0001869!4.89e-18!32;UBERON:0001893!9.52e-17!34;UBERON:0000956!3.19e-16!25;UBERON:0000203!3.19e-16!25;UBERON:0002791!3.15e-15!33;UBERON:0001950!3.95e-15!20;UBERON:0002020!1.13e-14!34;UBERON:0003528!1.13e-14!34;UBERON:0007023!2.02e-13!115;UBERON:0002780!3.24e-13!41;UBERON:0001890!3.24e-13!41;UBERON:0006240!3.24e-13!41;UBERON:0003080!8.30e-13!42;UBERON:0000955!1.51e-12!69;UBERON:0006238!1.51e-12!69;UBERON:0001049!5.05e-12!57;UBERON:0005068!5.05e-12!57;UBERON:0006241!5.05e-12!57;UBERON:0007135!5.05e-12!57;UBERON:0002616!1.87e-11!59;UBERON:0001017!1.06e-10!82;UBERON:0000073!2.59e-10!94;UBERON:0001016!2.59e-10!94;UBERON:0005743!6.03e-10!86;UBERON:0003056!1.08e-08!61;UBERON:0000349!2.61e-08!5;UBERON:0003075!4.31e-08!86;UBERON:0007284!4.31e-08!86;UBERON:0000153!1.19e-07!129;UBERON:0007811!1.19e-07!129;UBERON:0000033!1.53e-07!123;UBERON:0002346!1.64e-07!90;UBERON:0000200!4.82e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002046;1.48e-40;5!UBERON:0002368;2.32e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,1.48e-40,5;UBERON:0004117,1.48e-40,5;UBERON:0007689,1.48e-40,5;UBERON:0007123,1.48e-40,5;UBERON:0003091,1.48e-40,5;UBERON:0009722,2.25e-19,11;UBERON:0007690,2.25e-19,11;UBERON:0008814,1.85e-12,18;UBERON:0002368,4.03e-07,35 | |||
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| ||
|short_description=p@chr4:20253897..20253905,+ | |short_description=p@chr4:20253897..20253905,+ | ||
}} | }} |
Latest revision as of 04:16, 30 July 2015
Short description: | p@chr4:20253897..20253905, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:20253897..20253905, + |
Coexpression cluster: | C429_anaplastic_Mast_clear_Neutrophils_squamous_Eosinophils_oral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thyroid gland | 1.48e-40 | 5 |
pharyngeal pouch | 1.48e-40 | 5 |
thyroid diverticulum | 1.48e-40 | 5 |
pharyngeal pouch 2 | 1.48e-40 | 5 |
thyroid primordium | 1.48e-40 | 5 |
entire pharyngeal arch endoderm | 2.25e-19 | 11 |
early pharyngeal endoderm | 2.25e-19 | 11 |
pharyngeal arch system | 1.85e-12 | 18 |
endocrine gland | 4.03e-07 | 35 |