FFCP PHASE1:Hg19::chr4:20293145..20293149,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:20293145..20293149,+ | |||
|description=CAGE_peak_at_chr4:20293145..20293149,+ | |description=CAGE_peak_at_chr4:20293145..20293149,+ | ||
|id=chr4:20293145..20293149,+ | |id=chr4:20293145..20293149,+ | ||
|ontology_enrichment_celltype=CL:0002620!3.25e-12!23;CL:0000057!9.71e-07!75 | |ontology_enrichment_celltype=CL:0002620!3.25e-12!23;CL:0000057!9.71e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0002620;6.84e-13;23!CL:0002504;1.66e-07;3!CL:1000279;1.66e-07;3!CL:1000280;1.66e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,7.70e-13,23;CL:0002504,2.23e-07,3;CL:1000279,2.23e-07,3;CL:1000280,2.23e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.90e-11!365;UBERON:0007023!4.28e-11!115;UBERON:0002780!6.32e-10!41;UBERON:0001890!6.32e-10!41;UBERON:0006240!6.32e-10!41;UBERON:0003080!1.89e-09!42;UBERON:0003102!4.97e-09!95;UBERON:0001893!6.43e-09!34;UBERON:0002020!1.04e-08!34;UBERON:0003528!1.04e-08!34;UBERON:0001869!1.22e-08!32;UBERON:0001049!1.23e-08!57;UBERON:0005068!1.23e-08!57;UBERON:0006241!1.23e-08!57;UBERON:0007135!1.23e-08!57;UBERON:0000955!1.24e-08!69;UBERON:0006238!1.24e-08!69;UBERON:0002616!1.40e-08!59;UBERON:0002791!1.86e-08!33;UBERON:0002097!3.93e-08!40;UBERON:0000956!7.31e-08!25;UBERON:0000203!7.31e-08!25;UBERON:0002199!1.07e-07!45;UBERON:0002416!1.07e-07!45;UBERON:0002346!1.73e-07!90;UBERON:0000468!2.83e-07!659;UBERON:0003075!3.92e-07!86;UBERON:0007284!3.92e-07!86;UBERON:0001017!5.46e-07!82;UBERON:0000062!5.89e-07!511;UBERON:0002619!6.56e-07!22;UBERON:0003056!6.79e-07!61;UBERON:0000481!9.65e-07!347 | |ontology_enrichment_uberon=UBERON:0000475!2.90e-11!365;UBERON:0007023!4.28e-11!115;UBERON:0002780!6.32e-10!41;UBERON:0001890!6.32e-10!41;UBERON:0006240!6.32e-10!41;UBERON:0003080!1.89e-09!42;UBERON:0003102!4.97e-09!95;UBERON:0001893!6.43e-09!34;UBERON:0002020!1.04e-08!34;UBERON:0003528!1.04e-08!34;UBERON:0001869!1.22e-08!32;UBERON:0001049!1.23e-08!57;UBERON:0005068!1.23e-08!57;UBERON:0006241!1.23e-08!57;UBERON:0007135!1.23e-08!57;UBERON:0000955!1.24e-08!69;UBERON:0006238!1.24e-08!69;UBERON:0002616!1.40e-08!59;UBERON:0002791!1.86e-08!33;UBERON:0002097!3.93e-08!40;UBERON:0000956!7.31e-08!25;UBERON:0000203!7.31e-08!25;UBERON:0002199!1.07e-07!45;UBERON:0002416!1.07e-07!45;UBERON:0002346!1.73e-07!90;UBERON:0000468!2.83e-07!659;UBERON:0003075!3.92e-07!86;UBERON:0007284!3.92e-07!86;UBERON:0001017!5.46e-07!82;UBERON:0000062!5.89e-07!511;UBERON:0002619!6.56e-07!22;UBERON:0003056!6.79e-07!61;UBERON:0000481!9.65e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0003937;5.73e-07;12!UBERON:0005399;5.73e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,2.60e-09,99;UBERON:0002097,2.50e-08,41;UBERON:0002199,3.55e-08,46;UBERON:0002416,3.55e-08,46;UBERON:0003937,5.84e-07,12;UBERON:0005399,5.84e-07,12 | |||
|phase1_expression=0.363356758541113,0,0.845726424575827,0,0.446961094427288,0,0,0,0,0,0,1.52908960491121,0,0.123766352960047,0.331397375727916,0,0,0,0,0.246242116153576,0,0,0.85870796139317,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26883561193763,1.33037638477538,0.527008714158756,0.261958150995425,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.626984899610432,0,0,0.66944122552934,0,0,0,0,0,0.982297011124877,0.44905874525234,0,0,0,0.183201743930407,0,0,0,0,0,0.264818361626438,0.573673241497627,0,0,0,0,0,0,0.163461903113459,0,0,0,0,1.1409436430889,0,0.587172493218824,1.94247533241758,3.51127016755621,0.204154171254893,0,0.206651562351531,1.18800285728205,0.494533858557114,0,0,0,1.12606667884768,0.277064115484183,0.438977620880838,0.612975591598039,0.300476117813194,0,2.69084453533293,0.85422955527427,3.60284231971255,0.900273288253207,1.03052529238439,0.515281080091258,0.18611685633159,5.06328996723799,1.16924406193438,7.32057945307932,3.95814564161887,2.58633690910099,0.710019185033229,0.201504196455281,0.339121184620975,0,0,0.286804595389004,0,0,0.232387885739037,0.414644220061482,0.252320850875628,0.72995471815166,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0.402115889646523,0,0,0,0,0.463721619900307,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0.289562613335158,0.410952645100767,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.49076596687656,0,0.271265023699736,0.207970861530807,1.07057393278297,0.157702415033935,0.585707074963566,0.300946099727719,0,0,0,1.10621501125022,5.99496939829772,0,0,0,0,0,0,0,0,0.496215615637554,0,0,0.256278298511402,0,0.64341568457443,0,1.23367755042124,0.355123450626254,0.328508624055237,0.519254429183621,0.464841513839837,0.120859449591622,0,0,0.574072240823034,3.09554985611419,3.14698595902618,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.309123034943167,0,0,0,0,0,0,0.770243085573222,0.767518373630648,2.34322173223702,0.537101224341368,0.580066775656914,1.78975917573812,0.178064071293475,0,0,0.127612712494584,0,0,0.62962469366128,0.6970372701606,0,0,0,0,0.715624433709956,0,0.632758849437452,0.38126038784765,0,0,0.318203247925937,0,1.07923474549989,1.37268514868027,2.5918728516051,0,0,0,0,0.731140468893853,0,2.59349831675173,1.1312434556297,2.26016233240486,0,0,0,0,0,0,0,0,0,0,0.35667105148125,4.96665489698837,0.211107635297664,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88743956579008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.36408156524854,0,0,0.71623345421307,0,1.53580351049616,0,0.703347082052564,0.222617410045812,0,0.211125408127993,2.59022384726391,0.552567831062295,0,0,0,1.86623752597084,0.179736702294654,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0,0.174919999992391,0,0,0.508507300585533,0,0.344743373241465,0,0.173624994933292,0,0.964771509003264,0,0.110579259931225,0,0,0,1.11538995422883,1.38510465306835,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,1.08194319871046,0,0.353830258013357,0.611030144933625,0,0,0.208843899010911,0.202203398942031,0,0.234264445725339,0,0,0,1.18375320854817,2.41981432097328,1.53036380815245,0.252746318513952,0,0,0,0,0,1.19472429772959,0.284609546029793,0.138674673013139,0.347119476670262,0,0,0.34945333648406,0.51595809741485,0,0.0730893170861856,0,0.0969890164884194,0,0.677942222341597,0,0,0.379864775735272,0.195551382734803,0,0.213452994739353,0,0,2.63434171181606,0,0,0.49701014226173,0,0.407712618220842,0.418411385249333,0.407992870545287,0,0,0.136905378891993,0,0,0,0,0,2.15361907373044,0,0.429226048136571,0.223171457441873,0.53746777989381,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0.160753148465019,0,0,0,0,0.364497339948148,0,0.945668487590378,0.419636705079985,0.211200673038813,0,0.383830394638891,0.714695326373367,0,0,0.542999601753713,0,0,0,0,1.36310417428337,0,0,2.65013777824443,0.129282956361551,0.39669780522807,0,0,0.854299300541557,2.82967749179399,7.87054205159671,1.48849806543585,0.197611631897944,0,0,1.08803560673895,0,2.14441903734423,0.327872630709804,0,0.886068179966986,0,1.3771002377715,0,1.10929051536852,0.0620964029413835,0.138348634936231,0.124980407962107,0,0,0,1.40500471742064,0.28984205722165,0.895528817321244,0.701139929541673,2.77402930751307,0,0.754703705257725,0.889811221596536,0.457680136793847,0.756154618816195,0.621748802331122,0,0,0,0.931577741257556,4.14706207840855,0,0.521745061811734,0.150257608997218,1.52322084867518,0,0.909243296012797,0.966695013382396,0,1.19428766609585,0,1.37358282073117,1.010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| ||
|short_description=p@chr4:20293145..20293149,+ | |short_description=p@chr4:20293145..20293149,+ | ||
}} | }} |
Latest revision as of 04:16, 30 July 2015
Short description: | p@chr4:20293145..20293149, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:20293145..20293149, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 7.70e-13 | 23 |
enteric smooth muscle cell | 2.23e-07 | 3 |
smooth muscle cell of large intestine | 2.23e-07 | 3 |
smooth muscle cell of colon | 2.23e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
surface structure | 2.60e-09 | 99 |
skin of body | 2.50e-08 | 41 |
integument | 3.55e-08 | 46 |
integumental system | 3.55e-08 | 46 |
sex gland | 5.84e-07 | 12 |
male reproductive gland | 5.84e-07 | 12 |