FFCP PHASE1:Hg19::chr4:67441054..67441061,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:67441054..67441061,+ | |||
|coexpression_cluster_id=C91 | |coexpression_cluster_id=C91 | ||
|description=CAGE_peak_at_chr4:67441054..67441061,+ | |description=CAGE_peak_at_chr4:67441054..67441061,+ | ||
|id=chr4:67441054..67441061,+ | |id=chr4:67441054..67441061,+ | ||
|ontology_enrichment_celltype=CL:0000077!9.46e-17!19;CL:1000306!2.01e-12!4;CL:0002547!2.01e-12!4;CL:0000064!1.04e-08!3;CL:0005012!1.04e-08!3;CL:0000067!1.04e-08!3;CL:0002304!1.04e-08!3;CL:0000128!9.01e-07!7;CL:0000126!9.01e-07!7;CL:0000127!9.01e-07!7;CL:0002453!9.01e-07!7 | |ontology_enrichment_celltype=CL:0000077!9.46e-17!19;CL:1000306!2.01e-12!4;CL:0002547!2.01e-12!4;CL:0000064!1.04e-08!3;CL:0005012!1.04e-08!3;CL:0000067!1.04e-08!3;CL:0002304!1.04e-08!3;CL:0000128!9.01e-07!7;CL:0000126!9.01e-07!7;CL:0000127!9.01e-07!7;CL:0002453!9.01e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:1000306;4.11e-23;4!CL:0002547;4.11e-23;4!CL:0000077;4.52e-11;19!CL:0000632;8.96e-09;3!CL:0002603;1.21e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,4.60e-23,4;CL:0002547,4.60e-23,4;CL:0000077,4.37e-11,19;CL:0000632,8.96e-09,3;CL:0002603,1.04e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007625!2.84e-15!11;UBERON:0000415!2.01e-12!4;UBERON:0007240!2.01e-12!4;UBERON:0005742!2.01e-12!4;UBERON:0005734!2.01e-12!4;UBERON:0004664!2.01e-12!4;UBERON:0004663!2.01e-12!4;UBERON:0000488!2.02e-11!4;UBERON:0001778!1.04e-08!3;UBERON:0001775!1.04e-08!3;UBERON:0000019!2.97e-08!19;UBERON:0000047!2.97e-08!19;UBERON:0004088!2.97e-08!19;UBERON:0003072!2.97e-08!19;UBERON:0003071!2.97e-08!19;UBERON:0004128!2.97e-08!19;UBERON:0000970!8.98e-08!20;UBERON:0002203!1.27e-07!6;UBERON:0001768!1.27e-07!6;UBERON:0002104!2.44e-07!21;UBERON:0001456!2.44e-07!21 | |ontology_enrichment_uberon=UBERON:0007625!2.84e-15!11;UBERON:0000415!2.01e-12!4;UBERON:0007240!2.01e-12!4;UBERON:0005742!2.01e-12!4;UBERON:0005734!2.01e-12!4;UBERON:0004664!2.01e-12!4;UBERON:0004663!2.01e-12!4;UBERON:0000488!2.02e-11!4;UBERON:0001778!1.04e-08!3;UBERON:0001775!1.04e-08!3;UBERON:0000019!2.97e-08!19;UBERON:0000047!2.97e-08!19;UBERON:0004088!2.97e-08!19;UBERON:0003072!2.97e-08!19;UBERON:0003071!2.97e-08!19;UBERON:0004128!2.97e-08!19;UBERON:0000970!8.98e-08!20;UBERON:0002203!1.27e-07!6;UBERON:0001768!1.27e-07!6;UBERON:0002104!2.44e-07!21;UBERON:0001456!2.44e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;3.28e-23;1!UBERON:0004797;4.11e-23;4!UBERON:0000415;4.11e-23;4!UBERON:0007240;4.11e-23;4!UBERON:0005742;4.11e-23;4!UBERON:0005734;4.11e-23;4!UBERON:0004664;4.11e-23;4!UBERON:0004663;4.11e-23;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,4.60e-23,4;UBERON:0007240,4.60e-23,4;UBERON:0005742,4.60e-23,4;UBERON:0005734,4.60e-23,4;UBERON:0004664,4.60e-23,4;UBERON:0004663,4.60e-23,4;UBERON:0007195,5.13e-23,1;UBERON:0004797,1.23e-13,7 | |||
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| ||
|short_description=p@chr4:67441054..67441061,+ | |short_description=p@chr4:67441054..67441061,+ | ||
}} | }} |
Latest revision as of 06:06, 30 July 2015
Short description: | p@chr4:67441054..67441061, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:67441054..67441061, + |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 4.60e-23 | 4 |
fibroblast of the aortic adventitia | 4.60e-23 | 4 |
mesothelial cell | 4.37e-11 | 19 |
hepatic stellate cell | 8.96e-09 | 3 |
astrocyte of the cerebellum | 1.04e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
artery wall | 4.60e-23 | 4 |
tunica adventitia of artery | 4.60e-23 | 4 |
adventitia | 4.60e-23 | 4 |
tunica adventitia of blood vessel | 4.60e-23 | 4 |
aorta tunica adventitia | 4.60e-23 | 4 |
aorta wall | 4.60e-23 | 4 |
stroma of bone marrow | 5.13e-23 | 1 |
blood vessel layer | 1.23e-13 | 7 |