FFCP PHASE1:Hg19::chr4:85791597..85791604,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:85791597..85791604,- | |||
|coexpression_cluster_id=C139 | |coexpression_cluster_id=C139 | ||
|description=CAGE_peak_at_chr4:85791597..85791604,- | |description=CAGE_peak_at_chr4:85791597..85791604,- | ||
|id=chr4:85791597..85791604,- | |id=chr4:85791597..85791604,- | ||
|ontology_enrichment_celltype=CL:0002139!1.56e-27!24;CL:0000071!5.96e-24!18;CL:0002546!5.96e-24!18;CL:0000708!4.40e-21!3;CL:1000413!1.61e-19!9;CL:0000115!2.36e-18!35;CL:0002078!2.97e-14!44;CL:0000213!6.34e-13!57;CL:0000215!6.34e-13!57;CL:0002544!2.55e-11!6;CL:0000039!1.18e-09!7;CL:0000586!1.18e-09!7;CL:0000076!8.68e-08!62 | |ontology_enrichment_celltype=CL:0002139!1.56e-27!24;CL:0000071!5.96e-24!18;CL:0002546!5.96e-24!18;CL:0000708!4.40e-21!3;CL:1000413!1.61e-19!9;CL:0000115!2.36e-18!35;CL:0002078!2.97e-14!44;CL:0000213!6.34e-13!57;CL:0000215!6.34e-13!57;CL:0002544!2.55e-11!6;CL:0000039!1.18e-09!7;CL:0000586!1.18e-09!7;CL:0000076!8.68e-08!62 | ||
|ontology_enrichment_celltype_v019=CL:0002543;9.07e-18;6!CL:0000128;1.65e-15;7!CL:0000126;1.65e-15;7!CL:0000127;1.65e-15;7!CL:0000243;3.38e-07;15!CL:0000125;3.38e-07;15!CL:0000071;7.60e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002543,9.07e-18,6;CL:0000128,1.65e-15,7;CL:0000126,1.65e-15,7;CL:0000127,1.65e-15,7;CL:0002453,1.65e-15,7;CL:0000243,3.38e-07,15;CL:0000125,3.38e-07,15;CL:0000030,3.38e-07,15;CL:0000339,3.38e-07,15;CL:0000071,7.60e-07,18;CL:0002546,7.60e-07,18 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.16e-10;10!CL:0000339;3.38e-07;15!CL:0002546;7.60e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3093;1.22e-09;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,1.22e-09,11 | |||
|ontology_enrichment_uberon=UBERON:0001986!5.96e-24!18;UBERON:0004638!5.96e-24!18;UBERON:0004852!5.96e-24!18;UBERON:0003210!4.40e-21!3;UBERON:0003915!1.61e-19!9;UBERON:0004700!1.61e-19!9;UBERON:0001917!1.61e-19!9;UBERON:0000487!2.14e-19!22;UBERON:0006914!6.18e-17!25;UBERON:0000055!1.77e-08!69;UBERON:0002049!3.40e-07!79;UBERON:0007798!3.40e-07!79 | |ontology_enrichment_uberon=UBERON:0001986!5.96e-24!18;UBERON:0004638!5.96e-24!18;UBERON:0004852!5.96e-24!18;UBERON:0003210!4.40e-21!3;UBERON:0003915!1.61e-19!9;UBERON:0004700!1.61e-19!9;UBERON:0001917!1.61e-19!9;UBERON:0000487!2.14e-19!22;UBERON:0006914!6.18e-17!25;UBERON:0000055!1.77e-08!69;UBERON:0002049!3.40e-07!79;UBERON:0007798!3.40e-07!79 | ||
|ontology_enrichment_uberon_v019=UBERON:0001638;2.45e-12;9!UBERON:0003920;2.45e-12;9!UBERON:0004582;2.45e-12;9!UBERON:0004638;7.60e-07;18!UBERON:0001986;7.60e-07;18!UBERON:0004852;7.60e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001638,2.45e-12,9;UBERON:0003920,2.45e-12,9;UBERON:0004582,2.45e-12,9;UBERON:0004638,7.60e-07,18;UBERON:0001986,7.60e-07,18;UBERON:0004852,7.60e-07,18 | |||
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|short_description=p@chr4:85791597..85791604,- | |short_description=p@chr4:85791597..85791604,- | ||
}} | }} |
Latest revision as of 07:37, 30 July 2015
Short description: | p@chr4:85791597..85791604, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:85791597..85791604, - |
Coexpression cluster: | C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vein endothelial cell | 9.07e-18 | 6 |
oligodendrocyte | 1.65e-15 | 7 |
macroglial cell | 1.65e-15 | 7 |
astrocyte | 1.65e-15 | 7 |
oligodendrocyte precursor cell | 1.65e-15 | 7 |
glial cell (sensu Vertebrata) | 3.38e-07 | 15 |
glial cell | 3.38e-07 | 15 |
glioblast | 3.38e-07 | 15 |
glioblast (sensu Vertebrata) | 3.38e-07 | 15 |
blood vessel endothelial cell | 7.60e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.60e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
vein | 2.45e-12 | 9 |
venous blood vessel | 2.45e-12 | 9 |
venous system | 2.45e-12 | 9 |
blood vessel endothelium | 7.60e-07 | 18 |
endothelium | 7.60e-07 | 18 |
cardiovascular system endothelium | 7.60e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 1.22e-09 | 11 |