FFCP PHASE1:Hg19::chr4:95680548..95680553,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:95680548..95680553,- | |||
|coexpression_cluster_id=C516 | |||
|description=CAGE_peak_at_chr4:95680548..95680553,- | |||
|id=chr4:95680548..95680553,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002149;4.27e-34;6!CL:0002255;4.27e-34;6!CL:0000499;1.52e-08;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,4.27e-34,6;CL:0002255,4.27e-34,6;CL:0000499,1.52e-08,28 | |||
|ontology_enrichment_development_v019=UBERON:0005795;3.81e-21;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3001;4.27e-34;6!DOID:299;2.15e-09;25!DOID:120;8.32e-09;27!DOID:193;2.67e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,4.27e-34,6;DOID:299,2.15e-09,25;DOID:120,8.32e-09,27;DOID:193,2.67e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.01e-20!57;UBERON:0005068!3.01e-20!57;UBERON:0006241!3.01e-20!57;UBERON:0007135!3.01e-20!57;UBERON:0002616!1.60e-19!59;UBERON:0002308!3.18e-19!9;UBERON:0000125!3.18e-19!9;UBERON:0000073!4.45e-19!94;UBERON:0001016!4.45e-19!94;UBERON:0002780!4.69e-19!41;UBERON:0001890!4.69e-19!41;UBERON:0006240!4.69e-19!41;UBERON:0002791!8.20e-19!33;UBERON:0003080!1.38e-18!42;UBERON:0002020!2.36e-18!34;UBERON:0003528!2.36e-18!34;UBERON:0003075!2.42e-18!86;UBERON:0007284!2.42e-18!86;UBERON:0007023!2.80e-18!115;UBERON:0001893!2.99e-18!34;UBERON:0005743!4.11e-18!86;UBERON:0002346!1.87e-17!90;UBERON:0000955!2.92e-16!69;UBERON:0006238!2.92e-16!69;UBERON:0001017!3.83e-16!82;UBERON:0003056!1.66e-15!61;UBERON:0001869!5.66e-15!32;UBERON:0009663!2.53e-14!7;UBERON:0000998!3.27e-12!1;UBERON:0006868!3.27e-12!1;UBERON:0001882!5.05e-12!1;UBERON:0005403!5.05e-12!1;UBERON:0002902!1.19e-11!1;UBERON:0009899!1.19e-11!1;UBERON:0002336!1.32e-11!1;UBERON:0001018!1.32e-11!1;UBERON:0002473!1.32e-11!1;UBERON:0005340!1.32e-11!1;UBERON:0002316!1.32e-11!1;UBERON:0003544!1.32e-11!1;UBERON:0001020!1.32e-11!1;UBERON:0005970!1.32e-11!1;UBERON:0002437!1.32e-11!1;UBERON:0000369!1.40e-11!4;UBERON:0002435!1.40e-11!4;UBERON:0000204!1.40e-11!4;UBERON:0010082!1.40e-11!4;UBERON:0002363!1.47e-11!1;UBERON:0007647!1.47e-11!1;UBERON:0010115!1.47e-11!1;UBERON:0002022!1.81e-11!1;UBERON:0002420!2.89e-11!9;UBERON:0007245!2.89e-11!9;UBERON:0010009!2.89e-11!9;UBERON:0010011!2.89e-11!9;UBERON:0000454!2.89e-11!9;UBERON:0000033!2.79e-10!123;UBERON:0004121!7.56e-10!169;UBERON:0000153!9.96e-10!129;UBERON:0007811!9.96e-10!129;UBERON:0000924!1.42e-09!173;UBERON:0006601!1.42e-09!173;UBERON:0000349!1.62e-09!5;UBERON:0004111!1.61e-07!241;UBERON:0002619!1.72e-07!22;UBERON:0000025!4.06e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0000995;4.22e-13;17!UBERON:0003975;1.85e-12;18!UBERON:0004175;6.74e-11;21!UBERON:0003134;4.53e-08;33!UBERON:0000474;4.53e-08;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000995,6.74e-11,21;UBERON:0005795,1.80e-10,22;UBERON:0003975,1.80e-10,22;UBERON:0004175,2.15e-09,25;UBERON:0003134,8.21e-07,37;UBERON:0000474,8.21e-07,37 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,2.95051555169723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436838552768056,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:95680548..95680553,- | |||
}} |
Latest revision as of 08:10, 30 July 2015
Short description: | p@chr4:95680548..95680553, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:95680548..95680553, - |
Coexpression cluster: | C516_endometrioid_clear_serous_anaplastic_malignant_oral_uterus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 4.27e-34 | 6 |
stromal cell of endometrium | 4.27e-34 | 6 |
stromal cell | 1.52e-08 | 28 |
Ontology term | p-value | n |
---|---|---|
uterus | 6.74e-11 | 21 |
embryonic uterus | 1.80e-10 | 22 |
internal female genitalia | 1.80e-10 | 22 |
internal genitalia | 2.15e-09 | 25 |
female reproductive organ | 8.21e-07 | 37 |
female reproductive system | 8.21e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 4.27e-34 | 6 |
adenocarcinoma | 2.15e-09 | 25 |
female reproductive organ cancer | 8.32e-09 | 27 |
reproductive organ cancer | 2.67e-08 | 29 |