FFCP PHASE1:Hg19::chr5:103558207..103558210,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:103558207..103558210,+ | |||
|description=CAGE_peak_at_chr5:103558207..103558210,+ | |description=CAGE_peak_at_chr5:103558207..103558210,+ | ||
|id=chr5:103558207..103558210,+ | |id=chr5:103558207..103558210,+ | ||
|ontology_enrichment_celltype=CL:0000223!1.82e-11!59;CL:0000039!5.64e-11!7;CL:0000586!5.64e-11!7;CL:0002563!1.60e-07!4;CL:0002253!2.23e-07!2;CL:1000415!6.08e-07!2 | |ontology_enrichment_celltype=CL:0000223!1.82e-11!59;CL:0000039!5.64e-11!7;CL:0000586!5.64e-11!7;CL:0002563!1.60e-07!4;CL:0002253!2.23e-07!2;CL:1000415!6.08e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002319;2.21e-17;25!CL:0000243;9.73e-13;15!CL:0000125;9.73e-13;15!CL:0000095;1.63e-11;17!CL:0000540;1.44e-09;6!CL:0000404;1.44e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.09e-17,25;CL:0000243,9.17e-13,15;CL:0000125,9.17e-13,15;CL:0000030,9.17e-13,15;CL:0000339,9.17e-13,15;CL:0000095,1.55e-11,17;CL:0000123,1.55e-11,17;CL:0000540,1.44e-09,6;CL:0000031,1.44e-09,6;CL:0000404,1.44e-09,6;CL:0000133,3.25e-08,59;CL:0000047,1.69e-07,8;CL:0000221,6.51e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0006238;4.69e-19;10!CL:0000339;9.73e-13;15!CL:0000031;1.44e-09;6 | |||
|ontology_enrichment_disease=DOID:0050687!1.30e-22!143;DOID:305!1.71e-22!106;DOID:162!1.80e-17!235;DOID:14566!7.07e-17!239;DOID:3095!5.05e-08!22;DOID:2994!5.05e-08!22;DOID:299!3.94e-07!25 | |ontology_enrichment_disease=DOID:0050687!1.30e-22!143;DOID:305!1.71e-22!106;DOID:162!1.80e-17!235;DOID:14566!7.07e-17!239;DOID:3095!5.05e-08!22;DOID:2994!5.05e-08!22;DOID:299!3.94e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:3093;1.44e-17;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,1.33e-17,11 | |||
|ontology_enrichment_uberon=UBERON:0000344!1.50e-08!12;UBERON:0001242!1.60e-07!4;UBERON:0001262!1.60e-07!4;UBERON:0004786!1.60e-07!4;UBERON:0004808!1.60e-07!4;UBERON:0001277!1.60e-07!4;UBERON:0002294!1.75e-07!7;UBERON:0001173!1.75e-07!7;UBERON:0004912!1.75e-07!7;UBERON:0009497!6.90e-07!25;UBERON:0000015!6.90e-07!25;UBERON:0002423!6.90e-07!25;UBERON:0006235!6.90e-07!25;UBERON:0004161!6.90e-07!25;UBERON:0005911!6.98e-07!82;UBERON:0003133!8.84e-07!48 | |ontology_enrichment_uberon=UBERON:0000344!1.50e-08!12;UBERON:0001242!1.60e-07!4;UBERON:0001262!1.60e-07!4;UBERON:0004786!1.60e-07!4;UBERON:0004808!1.60e-07!4;UBERON:0001277!1.60e-07!4;UBERON:0002294!1.75e-07!7;UBERON:0001173!1.75e-07!7;UBERON:0004912!1.75e-07!7;UBERON:0009497!6.90e-07!25;UBERON:0000015!6.90e-07!25;UBERON:0002423!6.90e-07!25;UBERON:0006235!6.90e-07!25;UBERON:0004161!6.90e-07!25;UBERON:0005911!6.98e-07!82;UBERON:0003133!8.84e-07!48 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,1.54657762555539,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,1.05562704063997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.682760689712998,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0,0.569710279235006,0.23056390438806,0.0897576444097721,0.651884231532048,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0.141353071433941,0.649165919226273,0,0,0,0.296521128680622,0,0,0,0,0,0,0.391329237864179,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0.195551382734803,0.160317640503067,0,0,0.432271251462318,0,0,0,0,0,1.63085047288337,2.09205692624666,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.157566364614447,0.247247575143499,0.539228350833479,0.393709926058995,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684347351537318,0,0,0,0,0.496166021811951,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.11796972334774,0,0,0,0,0,0,0,0,0.261906694481422,0,0.443568258651136,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813689977576877,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0.874124575709564,0.380095503034311,0.101988829741982,0,0,0.50141507858475,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:103558207..103558210,+ | |short_description=p@chr5:103558207..103558210,+ | ||
}} | }} |
Latest revision as of 08:25, 30 July 2015
Short description: | p@chr5:103558207..103558210, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:103558207..103558210, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.09e-17 | 25 |
glial cell (sensu Vertebrata) | 9.17e-13 | 15 |
glial cell | 9.17e-13 | 15 |
glioblast | 9.17e-13 | 15 |
glioblast (sensu Vertebrata) | 9.17e-13 | 15 |
neuron associated cell | 1.55e-11 | 17 |
neuron associated cell (sensu Vertebrata) | 1.55e-11 | 17 |
neuron | 1.44e-09 | 6 |
neuroblast | 1.44e-09 | 6 |
electrically signaling cell | 1.44e-09 | 6 |
neurectodermal cell | 3.25e-08 | 59 |
neuronal stem cell | 1.69e-07 | 8 |
ectodermal cell | 6.51e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 1.33e-17 | 11 |